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Aliases : tig00001264_g7883.t1
Description : Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU proteome.RPS23 component
Gene families : OG_01_0004164 (OrthoFinder) Phylogenetic Tree(s): OG0004164_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Cpa|evm.model.tig00001264.27 | |
| Cluster | HCCA: Cluster_43 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cre12.g504200 | 30792072, RPS23 | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.25 | OrthoFinder | |
| Cz02g32260.t1 | No alias | Ribosomal protein S12/S23 [Interproscan]. | 0.23 | OrthoFinder | |
| Dusal.0029s00015.1 | 33203771 | Ribosomal protein S12/S23 [Interproscan]. | 0.19 | OrthoFinder | |
| EOD07302 | No alias | Ribosomal protein S12/S23 [Interproscan]. | 0.13 | OrthoFinder | |
| EOD33195 | No alias | Ribosomal protein S12/S23 [Interproscan]. | 0.13 | OrthoFinder | |
| OT_06G01850.1 | No alias | Ribosomal protein S12/S23 [Interproscan]. | 0.06 | OrthoFinder | |
| PTI_02G00080.1 | No alias | Ribosomal protein S12/S23 [Interproscan]. | 0.28 | OrthoFinder | |
| Sro922_g220630.1 | Contig2958.g23506 | 40S ribosomal protein S23 | 0.29 | OrthoFinder | |
| TP05G01460.1 | No alias | Ribosomal protein S12/S23 [Interproscan]. | 0.24 | OrthoFinder | |
| XM_002499719.1 | MICPUN_89912, 89912 | Ribosomal protein S12/S23 [Interproscan]. | 0.25 | OrthoFinder | |
| XM_003062101.1 | MicpuC2_48397, 48397 | Ribosomal protein S12/S23 [Interproscan]. | 0.12 | OrthoFinder | |
| lcl|LHPG02000012.1_cds_PRW45112.1_1697 | PRW45112 | 40S ribosomal S23 | 0.12 | OrthoFinder | |
| lcl|VRMN01000002.1_cds_KAA8497390.1_1119 | KAA8497390 | 40S ribosomal protein S23 | 0.18 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003735 | structural constituent of ribosome | IEA | Interproscan |
| CC | GO:0005840 | ribosome | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003723 | RNA binding | IEP | Enrichment |
| BP | GO:0006412 | translation | IEP | Enrichment |
| BP | GO:0006518 | peptide metabolic process | IEP | Enrichment |
| MF | GO:0008138 | protein tyrosine/serine/threonine phosphatase activity | IEP | Enrichment |
| BP | GO:0009058 | biosynthetic process | IEP | Enrichment |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | Enrichment |
| BP | GO:0019538 | protein metabolic process | IEP | Enrichment |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Enrichment |
| BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | Enrichment |
| BP | GO:0043043 | peptide biosynthetic process | IEP | Enrichment |
| BP | GO:0043603 | cellular amide metabolic process | IEP | Enrichment |
| BP | GO:0043604 | amide biosynthetic process | IEP | Enrichment |
| BP | GO:0044249 | cellular biosynthetic process | IEP | Enrichment |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | Enrichment |
| BP | GO:0044267 | cellular protein metabolic process | IEP | Enrichment |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | Enrichment |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | Enrichment |
| BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | Enrichment |
| BP | GO:1901576 | organic substance biosynthetic process | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR006032 | Ribosomal_S12/S23 | 22 | 119 |
| No external refs found! |