1. Home
  2. Species
  3. Cyanophora paradoxa
  4. Sequence
  5. Cpa|evm.model.tig00001258.10

Cpa|evm.model.tig00001258.10 (tig00001258_g7832.t1)


Aliases : tig00001258_g7832.t1

No description available


Gene families : OG_01_0000207 (OrthoFinder) Phylogenetic Tree(s): OG0000207_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00001258.10
Cluster HCCA: Cluster_135

Target Alias Description ECC score Gene Family Method Actions
Cre09.g407200 30780595 Prolycopene isomerase, chloroplastic OS=Solanum lycopersicum 0.05 OrthoFinder
Cre16.g651923 30776797 Secondary metabolism.terpenoids.terpenoid... 0.01 OrthoFinder
Cre16.g674950 30777568 Prolycopene isomerase, chloroplastic OS=Solanum lycopersicum 0.02 OrthoFinder
Cz14g22040.t1 No alias Amine oxidase [Interproscan]. 0.07 OrthoFinder
Dusal.0111s00019.1 33199801 Amine oxidase [Interproscan]. 0.01 OrthoFinder
Dusal.0195s00005.1 33196565 Amine oxidase [Interproscan]. 0.02 OrthoFinder
EOD14379 No alias NAD(P)-binding Rossmann-like domain [Interproscan]. 0.02 OrthoFinder
EOD16224 No alias Amine oxidase [Interproscan]. 0.01 OrthoFinder
EOD40572 No alias Amine oxidase [Interproscan]. 0.02 OrthoFinder
PTI_01G08810.1 No alias NAD(P)-binding Rossmann-like domain [Interproscan]. 0.02 OrthoFinder
PTI_06G02910.1 No alias Amine oxidase [Interproscan]. 0.03 OrthoFinder
Sro1228_g254380.1 Contig2695.g21739 Prolycopene isomerase, chloroplastic 0.02 OrthoFinder
Sro1649_g288630.1 Contig3529.g27273 Prolycopene isomerase, chloroplastic 0.09 OrthoFinder
Sro175_g076960.1 Contig1856.g16212 Prolycopene isomerase, chloroplastic 0.01 OrthoFinder
Sro570_g168610.1 Contig131.g1484 Prolycopene isomerase, chloroplastic 0.04 OrthoFinder
Sro94_g048820.1 Contig150.g1672 Prolycopene isomerase, chloroplastic 0.01 OrthoFinder
TP15G02230.1 No alias NAD(P)-binding Rossmann-like domain; Amine oxidase... 0.01 OrthoFinder
Transcript_contig_2488 2488 NAD(P)-binding Rossmann-like domain [Interproscan]. 0.01 OrthoFinder
Transcript_contig_61270 61270 Hypothetical protein 0.01 OrthoFinder
Transcript_contig_78738 78738 Hypothetical protein 0.04 OrthoFinder
XM_002505732.1 MICPUN_96715, 96715 Amine oxidase 0.02 OrthoFinder
XM_003055318.1 MicpuC2_13509, 13509 Amine oxidase [Interproscan]. 0.02 OrthoFinder
lcl|BLLF01000127.1_cds_GFH07954.1_2431 HaLaN_02839, GFH07954 Prolycopene isomerase, chloroplastic 0.03 OrthoFinder
lcl|BLLF01000143.1_cds_GFH08171.1_2648 HaLaN_03092, GFH08171 Putative chloroplast carotenoid isomerase 0.03 OrthoFinder
lcl|BLLF01000143.1_cds_GFH08172.1_2649 HaLaN_03093, GFH08172 Putative chloroplast carotenoid isomerase 0.02 OrthoFinder
lcl|BLLF01000280.1_cds_GFH10007.1_4484 HaLaN_05249, GFH10007 Prolycopene isomerase, chloroplastic 0.03 OrthoFinder
lcl|LHPG02000013.1_cds_PRW44291.1_2128 PRW44291 ABC transporter A family member 7-like isoform B 0.02 OrthoFinder
lcl|LHPG02000017.1_cds_PRW33144.1_3623 PRW33144 Carotene isomerase 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0003847 1-alkyl-2-acetylglycerophosphocholine esterase activity IEP Enrichment
MF GO:0005215 transporter activity IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
BP GO:0006298 mismatch repair IEP Enrichment
CC GO:0009521 photosystem IEP Enrichment
CC GO:0009523 photosystem II IEP Enrichment
CC GO:0009654 photosystem II oxygen evolving complex IEP Enrichment
MF GO:0015399 primary active transmembrane transporter activity IEP Enrichment
CC GO:0016020 membrane IEP Enrichment
CC GO:0016021 integral component of membrane IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Enrichment
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Enrichment
MF GO:0016887 ATPase IEP Enrichment
BP GO:0017004 cytochrome complex assembly IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
MF GO:0022804 active transmembrane transporter activity IEP Enrichment
MF GO:0022857 transmembrane transporter activity IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
CC GO:0031224 intrinsic component of membrane IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
BP GO:0034622 cellular protein-containing complex assembly IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
BP GO:0043933 protein-containing complex subunit organization IEP Enrichment
MF GO:0051213 dioxygenase activity IEP Enrichment
MF GO:0052689 carboxylic ester hydrolase activity IEP Enrichment
BP GO:0055085 transmembrane transport IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
BP GO:0065003 protein-containing complex assembly IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment

No InterPro domains available for this sequence

No external refs found!