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  5. Cpa|evm.model.tig00001249.9

Cpa|evm.model.tig00001249.9 (tig00001249_g7779.t1)


Aliases : tig00001249_g7779.t1

Description : Thioredoxin F, chloroplastic OS=Oryza sativa subsp. japonica


Gene families : OG_01_0000032 (OrthoFinder) Phylogenetic Tree(s): OG0000032_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00001249.9
Cluster HCCA: Cluster_159

Target Alias Description ECC score Gene Family Method Actions
EOD18409 No alias Thioredoxin domain [Interproscan]. 0.01 OrthoFinder
PTI_18G00650.1 No alias Thioredoxin domain [Interproscan]. 0.01 OrthoFinder
Sro347_g123100.1 Contig477.g6478 Thioredoxin F-type, chloroplastic 0.01 OrthoFinder
Transcript_contig_54169 54169 Thioredoxin domain; PUB domain [Interproscan]. 0.01 OrthoFinder
Vocar.0001s0480.1 32885809 Thioredoxin domain [Interproscan]. 0.03 OrthoFinder
XM_003061596.1 MicpuC2_28559, 28559 Thioredoxin domain [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005216 ion channel activity IEP Enrichment
MF GO:0005261 cation channel activity IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
CC GO:0005750 mitochondrial respiratory chain complex III IEP Enrichment
BP GO:0006163 purine nucleotide metabolic process IEP Enrichment
BP GO:0006164 purine nucleotide biosynthetic process IEP Enrichment
BP GO:0006754 ATP biosynthetic process IEP Enrichment
BP GO:0006812 cation transport IEP Enrichment
MF GO:0008324 cation transmembrane transporter activity IEP Enrichment
MF GO:0009055 electron transfer activity IEP Enrichment
BP GO:0009141 nucleoside triphosphate metabolic process IEP Enrichment
BP GO:0009142 nucleoside triphosphate biosynthetic process IEP Enrichment
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP Enrichment
BP GO:0009145 purine nucleoside triphosphate biosynthetic process IEP Enrichment
BP GO:0009150 purine ribonucleotide metabolic process IEP Enrichment
BP GO:0009152 purine ribonucleotide biosynthetic process IEP Enrichment
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP Enrichment
BP GO:0009201 ribonucleoside triphosphate biosynthetic process IEP Enrichment
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP Enrichment
BP GO:0009206 purine ribonucleoside triphosphate biosynthetic process IEP Enrichment
BP GO:0009259 ribonucleotide metabolic process IEP Enrichment
BP GO:0009260 ribonucleotide biosynthetic process IEP Enrichment
MF GO:0015078 proton transmembrane transporter activity IEP Enrichment
MF GO:0015252 proton channel activity IEP Enrichment
MF GO:0015267 channel activity IEP Enrichment
BP GO:0015985 energy coupled proton transport, down electrochemical gradient IEP Enrichment
BP GO:0015986 ATP synthesis coupled proton transport IEP Enrichment
MF GO:0016874 ligase activity IEP Enrichment
BP GO:0019693 ribose phosphate metabolic process IEP Enrichment
MF GO:0022803 passive transmembrane transporter activity IEP Enrichment
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
CC GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain IEP Enrichment
BP GO:0034220 ion transmembrane transport IEP Enrichment
CC GO:0045261 proton-transporting ATP synthase complex, catalytic core F(1) IEP Enrichment
CC GO:0045275 respiratory chain complex III IEP Enrichment
BP GO:0046034 ATP metabolic process IEP Enrichment
BP GO:0046390 ribose phosphate biosynthetic process IEP Enrichment
MF GO:0046933 proton-transporting ATP synthase activity, rotational mechanism IEP Enrichment
BP GO:0055085 transmembrane transport IEP Enrichment
CC GO:0070069 cytochrome complex IEP Enrichment
BP GO:0072521 purine-containing compound metabolic process IEP Enrichment
BP GO:0072522 purine-containing compound biosynthetic process IEP Enrichment
BP GO:0098655 cation transmembrane transport IEP Enrichment
BP GO:0098660 inorganic ion transmembrane transport IEP Enrichment
BP GO:0098662 inorganic cation transmembrane transport IEP Enrichment
CC GO:0098796 membrane protein complex IEP Enrichment
CC GO:0098798 mitochondrial protein-containing complex IEP Enrichment
CC GO:0098800 inner mitochondrial membrane protein complex IEP Enrichment
CC GO:0098803 respiratory chain complex IEP Enrichment
BP GO:1901135 carbohydrate derivative metabolic process IEP Enrichment
BP GO:1901137 carbohydrate derivative biosynthetic process IEP Enrichment
BP GO:1901566 organonitrogen compound biosynthetic process IEP Enrichment
CC GO:1902494 catalytic complex IEP Enrichment
BP GO:1902600 proton transmembrane transport IEP Enrichment
CC GO:1990204 oxidoreductase complex IEP Enrichment
InterPro domains Description Start Stop
IPR013766 Thioredoxin_domain 50 150
No external refs found!