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  5. Cpa|evm.model.tig00000097.3

Cpa|evm.model.tig00000097.3 (tig00000097_g3995.t1)


Aliases : tig00000097_g3995.t1

Description : RNA-directed DNA polymerase homolog OS=Oenothera berteroana


Gene families : OG_01_0000258 (OrthoFinder) Phylogenetic Tree(s): OG0000258_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000097.3
Cluster HCCA: Cluster_28

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000444.2 tig00021332_g20320.t1 No description available 0.03 OrthoFinder
Cpa|evm.model.tig00000489.23 tig00000381_g24536.t1 No description available 0.04 OrthoFinder
Cpa|evm.model.tig00000520.3 tig00021319_g20263.t1 No description available 0.04 OrthoFinder
Cpa|evm.model.tig00000581.2 tig00001052_g6619.t1 No description available 0.05 OrthoFinder
Cpa|evm.model.tig00000607.5 tig00000097_g3995.t1 RNA-directed DNA polymerase homolog OS=Oenothera berteroana 0.03 OrthoFinder
Cpa|evm.model.tig00020531.10 tig00020531_g10039.t1 No description available 0.04 OrthoFinder
Cpa|evm.model.tig00020746.23 tig00000381_g24542.t1 No description available 0.06 OrthoFinder
Cpa|evm.model.tig00020770.4 tig00020770_g13696.t1 No description available 0.05 OrthoFinder
Cpa|evm.model.tig00020770.6 tig00021319_g20263.t1 No description available 0.03 OrthoFinder
Cpa|evm.model.tig00020770.7 tig00021319_g20263.t1 No description available 0.03 OrthoFinder
Cpa|evm.model.tig00021326.29 tig00021326_g20295.t2 No description available 0.04 OrthoFinder
Cpa|evm.model.tig00021358.4 tig00021319_g20263.t1 RNA-directed DNA polymerase homolog OS=Oenothera berteroana 0.04 OrthoFinder
Cpa|evm.model.tig00021373.1 tig00000042_g15521.t1 No description available 0.03 OrthoFinder
Cpa|evm.model.tig00021518.13 tig00021518_g22031.t1 No description available 0.03 OrthoFinder
Cpa|evm.model.tig00021746.4 tig00021319_g20263.t1 No description available 0.04 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0030001 metal ion transport IEP Enrichment
MF GO:0046873 metal ion transmembrane transporter activity IEP Enrichment
InterPro domains Description Start Stop
IPR041577 RT_RNaseH_2 1107 1208
IPR041588 Integrase_H2C2 1710 1766
IPR000477 RT_dom 899 1061
No external refs found!