1. Home
  2. Species
  3. Cyanophora paradoxa
  4. Sequence
  5. Cpa|evm.model.tig00001206.7

Cpa|evm.model.tig00001206.7 (tig00001206_g7490.t1)


Aliases : tig00001206_g7490.t1

Description : Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU proteome component.RPL22 component


Gene families : OG_01_0002253 (OrthoFinder) Phylogenetic Tree(s): OG0002253_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00001206.7
Cluster HCCA: Cluster_43

Target Alias Description ECC score Gene Family Method Actions
Cre07.g357850 30774301, RPL22 Protein biosynthesis.cytosolic ribosome.large subunit... 0.27 OrthoFinder
Cz08g30250.t1 No alias Ribosomal protein L22e [Interproscan]. 0.21 OrthoFinder
Dusal.0067s00003.1 33194677 Ribosomal protein L22e [Interproscan]. 0.24 OrthoFinder
EOD18860 No alias Ribosomal protein L22e [Interproscan]. 0.06 OrthoFinder
OT_12G02920.1 No alias Ribosomal protein L22e [Interproscan]. 0.2 OrthoFinder
PTI_20G02050.1 No alias Ribosomal protein L22e [Interproscan]. 0.27 OrthoFinder
Sro89_g046870.1 Contig3846.g29608 60S ribosomal protein L22 0.28 OrthoFinder
SymbC1.scaffold1954.5 1954.5 Ribosomal protein L22e [Interproscan]. 0.02 OrthoFinder
TP06G02320.1 No alias Ribosomal protein L22e [Interproscan]. 0.21 OrthoFinder
Transcript_contig_80087 80087 Ribosomal protein L22e [Interproscan]. 0.03 OrthoFinder
Vocar.0051s0045.1 32886996 Ribosomal protein L22e [Interproscan]. 0.17 OrthoFinder
XM_002499837.1 MICPUN_90144, 90144 Ribosomal protein L22e [Interproscan]. 0.19 OrthoFinder
XM_003055223.1 MicpuC2_31192, 31192 Ribosomal protein L22e [Interproscan]. 0.12 OrthoFinder
lcl|LHPG02000014.1_cds_PRW39267.1_2590 PRW39267 60S ribosomal L22-2 0.18 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8499191.1_8144 KAA8499191 60S ribosomal protein L22 0.19 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006412 translation IEP Enrichment
BP GO:0006518 peptide metabolic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
MF GO:0008017 microtubule binding IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
BP GO:0009058 biosynthetic process IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
BP GO:0010024 phytochromobilin biosynthetic process IEP Enrichment
MF GO:0015631 tubulin binding IEP Enrichment
MF GO:0016636 oxidoreductase activity, acting on the CH-CH group of donors, iron-sulfur protein as acceptor IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
BP GO:0033013 tetrapyrrole metabolic process IEP Enrichment
BP GO:0033014 tetrapyrrole biosynthetic process IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0034645 cellular macromolecule biosynthetic process IEP Enrichment
BP GO:0043043 peptide biosynthetic process IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
BP GO:0043603 cellular amide metabolic process IEP Enrichment
BP GO:0043604 amide biosynthetic process IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0044249 cellular biosynthetic process IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0044267 cellular protein metabolic process IEP Enrichment
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Enrichment
MF GO:0050897 cobalt ion binding IEP Enrichment
BP GO:0051202 phytochromobilin metabolic process IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
BP GO:1901566 organonitrogen compound biosynthetic process IEP Enrichment
BP GO:1901576 organic substance biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR002671 Ribosomal_L22e 17 121
No external refs found!