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  5. UNPLg00901.t1

UNPLg00901.t1


Description : SMCs flexible hinge [Interproscan].


Gene families : OG_01_0001963 (OrthoFinder) Phylogenetic Tree(s): OG0001963_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: UNPLg00901.t1
Cluster HCCA: Cluster_40

Target Alias Description ECC score Gene Family Method Actions
Cre10.g440200 30790391, SMC5B DNA damage response.DNA repair mechanisms.homologous... 0.02 OrthoFinder
EOD22014 No alias Rad50/SbcC-type AAA domain [Interproscan]. 0.03 OrthoFinder
EOD27314 No alias RecF/RecN/SMC, N-terminal [Interproscan]. 0.03 OrthoFinder
OT_01G06360.1 No alias Rad50/SbcC-type AAA domain [Interproscan]. 0.05 OrthoFinder
PTI_03G04690.1 No alias RecF/RecN/SMC, N-terminal [Interproscan]. 0.05 OrthoFinder
Sro61_g035110.1 Contig3112.g24764 Of chromosomes protein 5 0.04 OrthoFinder
Transcript_contig_58766 58766 Hypothetical protein 0.02 OrthoFinder
Vocar.0001s1278.1 32885715 RecF/RecN/SMC, N-terminal [Interproscan]. 0.03 OrthoFinder
lcl|VRMN01000006.1_cds_KAA8493710.1_4472 KAA8493710 Structural maintenance of chromosomes protein 5 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0005694 chromosome IEA Interproscan
BP GO:0051276 chromosome organization IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000226 microtubule cytoskeleton organization IEP Enrichment
BP GO:0000723 telomere maintenance IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003677 DNA binding IEP Enrichment
MF GO:0003690 double-stranded DNA binding IEP Enrichment
CC GO:0005634 nucleus IEP Enrichment
BP GO:0006259 DNA metabolic process IEP Enrichment
BP GO:0006260 DNA replication IEP Enrichment
BP GO:0006281 DNA repair IEP Enrichment
BP GO:0006298 mismatch repair IEP Enrichment
BP GO:0006950 response to stress IEP Enrichment
BP GO:0006974 cellular response to DNA damage stimulus IEP Enrichment
BP GO:0007010 cytoskeleton organization IEP Enrichment
BP GO:0007051 spindle organization IEP Enrichment
BP GO:0007062 sister chromatid cohesion IEP Enrichment
BP GO:0007064 mitotic sister chromatid cohesion IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
BP GO:0022402 cell cycle process IEP Enrichment
MF GO:0030983 mismatched DNA binding IEP Enrichment
BP GO:0032200 telomere organization IEP Enrichment
BP GO:0033554 cellular response to stress IEP Enrichment
BP GO:0034645 cellular macromolecule biosynthetic process IEP Enrichment
CC GO:0042575 DNA polymerase complex IEP Enrichment
CC GO:0043625 delta DNA polymerase complex IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0050896 response to stimulus IEP Enrichment
BP GO:0051225 spindle assembly IEP Enrichment
BP GO:0051716 cellular response to stimulus IEP Enrichment
BP GO:0060249 anatomical structure homeostasis IEP Enrichment
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Enrichment
CC GO:0070652 HAUS complex IEP Enrichment
BP GO:0070925 organelle assembly IEP Enrichment
BP GO:1903047 mitotic cell cycle process IEP Enrichment
InterPro domains Description Start Stop
IPR010935 SMC_hinge 50 100
No external refs found!