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  5. Cpa|evm.model.tig00001177.18

Cpa|evm.model.tig00001177.18 (tig00001177_g7373.t1)


Aliases : tig00001177_g7373.t1

No description available


Gene families : OG_01_0000100 (OrthoFinder) Phylogenetic Tree(s): OG0000100_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00001177.18
Cluster HCCA: Cluster_146

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000057.20 tig00000057_g36.t2 No description available 0.03 OrthoFinder
Cpa|evm.model.tig00000076.164 tig00000076_g2452.t1 No description available 0.04 OrthoFinder
Cpa|evm.model.tig00000147.57 tig00000147_g9497.t1 No description available 0.06 OrthoFinder
Cpa|evm.model.tig00000269.64 tig00000269_g23726.t1 No description available 0.06 OrthoFinder
Cpa|evm.model.tig00000269.65 tig00000269_g23726.t1 No description available 0.04 OrthoFinder
Cpa|evm.model.tig00000882.19 tig00000882_g5264.t1 No description available 0.04 OrthoFinder
Cpa|evm.model.tig00020553.62 tig00020553_g10553.t1 No description available 0.06 OrthoFinder
Cpa|evm.model.tig00020553.63 tig00020553_g10553.t1 No description available 0.04 OrthoFinder
Cpa|evm.model.tig00021275.5 tig00021275_g19869.t1 No description available 0.05 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay IEP Enrichment
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP Enrichment
MF GO:0004519 endonuclease activity IEP Enrichment
MF GO:0004521 endoribonuclease activity IEP Enrichment
MF GO:0004525 ribonuclease III activity IEP Enrichment
MF GO:0004540 ribonuclease activity IEP Enrichment
BP GO:0006401 RNA catabolic process IEP Enrichment
BP GO:0006402 mRNA catabolic process IEP Enrichment
BP GO:0009057 macromolecule catabolic process IEP Enrichment
BP GO:0009892 negative regulation of metabolic process IEP Enrichment
BP GO:0010468 regulation of gene expression IEP Enrichment
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Enrichment
BP GO:0010629 negative regulation of gene expression IEP Enrichment
BP GO:0016071 mRNA metabolic process IEP Enrichment
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP Enrichment
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Enrichment
BP GO:0019222 regulation of metabolic process IEP Enrichment
BP GO:0019439 aromatic compound catabolic process IEP Enrichment
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP Enrichment
BP GO:0034655 nucleobase-containing compound catabolic process IEP Enrichment
BP GO:0044265 cellular macromolecule catabolic process IEP Enrichment
BP GO:0044270 cellular nitrogen compound catabolic process IEP Enrichment
BP GO:0046700 heterocycle catabolic process IEP Enrichment
BP GO:0048519 negative regulation of biological process IEP Enrichment
BP GO:0060255 regulation of macromolecule metabolic process IEP Enrichment
BP GO:1901361 organic cyclic compound catabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR001810 F-box_dom 42 78
No external refs found!