Description : Ribosomal protein 50S-L18Ae/60S-L20/60S-L18A [Interproscan].
Gene families : OG_01_0002951 (OrthoFinder) Phylogenetic Tree(s): OG0002951_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: UNPLg00655.t1 | |
Cluster | HCCA: Cluster_80 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Cpa|evm.model.tig00000615.59 | tig00000615_g2588.t1 | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.23 | OrthoFinder | |
Cre01.g047750 | 30789695, RPL18a | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.48 | OrthoFinder | |
Dusal.0268s00002.1 | 33190613 | Ribosomal protein 50S-L18Ae/60S-L20/60S-L18A [Interproscan]. | 0.07 | OrthoFinder | |
EOD26288 | No alias | Ribosomal protein 50S-L18Ae/60S-L20/60S-L18A [Interproscan]. | 0.06 | OrthoFinder | |
EOD38969 | No alias | Ribosomal protein 50S-L18Ae/60S-L20/60S-L18A [Interproscan]. | 0.09 | OrthoFinder | |
OT_07G00180.1 | No alias | Ribosomal protein 50S-L18Ae/60S-L20/60S-L18A [Interproscan]. | 0.24 | OrthoFinder | |
PTI_09G04120.1 | No alias | Ribosomal protein 50S-L18Ae/60S-L20/60S-L18A [Interproscan]. | 0.35 | OrthoFinder | |
Sro569_g168300.1 | Contig1581.g14356 | 60S ribosomal protein L18a | 0.43 | OrthoFinder | |
TP04G04550.1 | No alias | Ribosomal protein 50S-L18Ae/60S-L20/60S-L18A [Interproscan]. | 0.14 | OrthoFinder | |
Vocar.0001s0546.1 | 32884270 | Ribosomal protein 50S-L18Ae/60S-L20/60S-L18A [Interproscan]. | 0.09 | OrthoFinder | |
XM_002501183.1 | MICPUN_57540, 57540 | Ribosomal protein 50S-L18Ae/60S-L20/60S-L18A [Interproscan]. | 0.23 | OrthoFinder | |
XM_003062266.1 | MicpuC2_49713, 49713 | Ribosomal protein 50S-L18Ae/60S-L20/60S-L18A [Interproscan]. | 0.11 | OrthoFinder | |
lcl|BLLF01009296.1_cds_GFH33674.1_28151 | HaLaN_33080, GFH33674 | 60S ribosomal protein L18a-2 | 0.06 | OrthoFinder | |
lcl|LHPG02000007.1_cds_PRW57226.1_9365 | PRW57226 | 60S ribosomal L18a-2 | 0.2 | OrthoFinder | |
lcl|VRMN01000003.1_cds_KAA8495548.1_1546 | KAA8495548 | 60S ribosomal protein L18a | 0.19 | OrthoFinder |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003735 | structural constituent of ribosome | IEA | Interproscan |
CC | GO:0005840 | ribosome | IEA | Interproscan |
BP | GO:0006412 | translation | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0000313 | organellar ribosome | IEP | Enrichment |
MF | GO:0003723 | RNA binding | IEP | Enrichment |
MF | GO:0004017 | adenylate kinase activity | IEP | Enrichment |
CC | GO:0005759 | mitochondrial matrix | IEP | Enrichment |
CC | GO:0005761 | mitochondrial ribosome | IEP | Enrichment |
BP | GO:0006457 | protein folding | IEP | Enrichment |
CC | GO:0015934 | large ribosomal subunit | IEP | Enrichment |
CC | GO:0016272 | prefoldin complex | IEP | Enrichment |
MF | GO:0016742 | hydroxymethyl-, formyl- and related transferase activity | IEP | Enrichment |
MF | GO:0016776 | phosphotransferase activity, phosphate group as acceptor | IEP | Enrichment |
MF | GO:0019205 | nucleobase-containing compound kinase activity | IEP | Enrichment |
BP | GO:0022613 | ribonucleoprotein complex biogenesis | IEP | Enrichment |
CC | GO:0031974 | membrane-enclosed lumen | IEP | Enrichment |
BP | GO:0042254 | ribosome biogenesis | IEP | Enrichment |
CC | GO:0043233 | organelle lumen | IEP | Enrichment |
CC | GO:0044391 | ribosomal subunit | IEP | Enrichment |
MF | GO:0050145 | nucleoside monophosphate kinase activity | IEP | Enrichment |
CC | GO:0070013 | intracellular organelle lumen | IEP | Enrichment |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR023573 | Ribosomal_L18a//L18Ae/LX | 10 | 131 |
No external refs found! |