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  5. UNPLg00366.t1

UNPLg00366.t1


Description : LSM domain, eukaryotic/archaea-type [Interproscan].


Gene families : OG_01_0000904 (OrthoFinder) Phylogenetic Tree(s): OG0000904_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: UNPLg00366.t1
Cluster HCCA: Cluster_145

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020912.17 tig00020912_g15787.t1 RNA processing.RNA splicing.U1/U2/U4/U5-associated Sm... 0.03 OrthoFinder
Cre06.g251300 30779242 RNA processing.RNA splicing.U6-associated LSm accessory... 0.02 OrthoFinder
Sro479_g151180.1 Contig1858.g16253 Ribonucleoprotein Sm D3 0.02 OrthoFinder
Transcript_contig_59145 59145 LSM domain, eukaryotic/archaea-type [Interproscan]. 0.02 OrthoFinder
Vocar.0020s0119.1 32886653 LSM domain, eukaryotic/archaea-type [Interproscan]. 0.02 OrthoFinder
XM_002507873.1 MICPUN_84175, 84175 LSM domain, eukaryotic/archaea-type [Interproscan]. 0.02 OrthoFinder
XM_003059126.1 MicpuC2_69519, 69519 LSM domain, eukaryotic/archaea-type [Interproscan]. 0.02 OrthoFinder
lcl|LHPG02000004.1_cds_PRW59229.1_7217 PRW59229 Small nuclear ribonucleo Sm D3 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000123 histone acetyltransferase complex IEP Enrichment
BP GO:0000469 cleavage involved in rRNA processing IEP Enrichment
MF GO:0001671 ATPase activator activity IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
CC GO:0005741 mitochondrial outer membrane IEP Enrichment
CC GO:0005743 mitochondrial inner membrane IEP Enrichment
CC GO:0005787 signal peptidase complex IEP Enrichment
CC GO:0005840 ribosome IEP Enrichment
BP GO:0006412 translation IEP Enrichment
BP GO:0006465 signal peptide processing IEP Enrichment
BP GO:0006473 protein acetylation IEP Enrichment
BP GO:0006475 internal protein amino acid acetylation IEP Enrichment
BP GO:0006518 peptide metabolic process IEP Enrichment
MF GO:0008047 enzyme activator activity IEP Enrichment
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
MF GO:0015298 solute:cation antiporter activity IEP Enrichment
MF GO:0015299 solute:proton antiporter activity IEP Enrichment
BP GO:0016485 protein processing IEP Enrichment
BP GO:0016569 covalent chromatin modification IEP Enrichment
BP GO:0016570 histone modification IEP Enrichment
BP GO:0016573 histone acetylation IEP Enrichment
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Enrichment
BP GO:0018205 peptidyl-lysine modification IEP Enrichment
BP GO:0018393 internal peptidyl-lysine acetylation IEP Enrichment
BP GO:0018394 peptidyl-lysine acetylation IEP Enrichment
CC GO:0019866 organelle inner membrane IEP Enrichment
CC GO:0019867 outer membrane IEP Enrichment
BP GO:0022900 electron transport chain IEP Enrichment
BP GO:0022904 respiratory electron transport chain IEP Enrichment
CC GO:0031090 organelle membrane IEP Enrichment
CC GO:0031248 protein acetyltransferase complex IEP Enrichment
CC GO:0031966 mitochondrial membrane IEP Enrichment
CC GO:0031968 organelle outer membrane IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0034645 cellular macromolecule biosynthetic process IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
BP GO:0043543 protein acylation IEP Enrichment
BP GO:0043603 cellular amide metabolic process IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
MF GO:0051087 chaperone binding IEP Enrichment
BP GO:0051604 protein maturation IEP Enrichment
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Enrichment
MF GO:0060590 ATPase regulator activity IEP Enrichment
CC GO:0061617 MICOS complex IEP Enrichment
BP GO:0090305 nucleic acid phosphodiester bond hydrolysis IEP Enrichment
BP GO:0090501 RNA phosphodiester bond hydrolysis IEP Enrichment
CC GO:0098588 bounding membrane of organelle IEP Enrichment
CC GO:0098796 membrane protein complex IEP Enrichment
CC GO:0098798 mitochondrial protein-containing complex IEP Enrichment
CC GO:0098800 inner mitochondrial membrane protein complex IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP Enrichment
CC GO:1902493 acetyltransferase complex IEP Enrichment
CC GO:1902494 catalytic complex IEP Enrichment
CC GO:1905368 peptidase complex IEP Enrichment
InterPro domains Description Start Stop
IPR001163 LSM_dom_euk/arc 6 70
No external refs found!