Cpa|evm.model.tig00001160.15 (tig00001160_g7349.t1)


Aliases : tig00001160_g7349.t1

Description : Protein degradation.26S proteasome.20S core protease.alpha-type subunits.alpha type-1 component


Gene families : OG_01_0003165 (OrthoFinder) Phylogenetic Tree(s): OG0003165_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00001160.15
Cluster HCCA: Cluster_148

Target Alias Description ECC score Gene Family Method Actions
Cre17.g705400 30782060, POA1 Protein degradation.26S proteasome.20S core... 0.13 OrthoFinder
Cz18g11130.t1 No alias Proteasome, subunit alpha/beta; Proteasome... 0.03 OrthoFinder
Dusal.0456s00008.1 33199044 Proteasome, subunit alpha/beta; Proteasome... 0.02 OrthoFinder
EOD10346 No alias Proteasome, subunit alpha/beta; Proteasome... 0.1 OrthoFinder
EOD29147 No alias Proteasome, subunit alpha/beta; Proteasome... 0.1 OrthoFinder
OT_06G00380.1 No alias Proteasome alpha-subunit, N-terminal domain; Proteasome,... 0.04 OrthoFinder
PTI_01G01300.1 No alias Proteasome, subunit alpha/beta; Proteasome... 0.08 OrthoFinder
Sro383_g131270.1 Contig132.g1492 Alpha type-6 0.15 OrthoFinder
TP19G00110.1 No alias Proteasome, subunit alpha/beta; Proteasome... 0.1 OrthoFinder
Vocar.0004s0230.1 32889720 Proteasome alpha-subunit, N-terminal domain; Proteasome,... 0.03 OrthoFinder
XM_002500765.1 MICPUN_107861, 107861 Proteasome, subunit alpha/beta; Proteasome... 0.08 OrthoFinder
XM_003059346.1 MicpuC2_49613, 49613 Proteasome, subunit alpha/beta; Proteasome... 0.05 OrthoFinder
lcl|BLLF01000061.1_cds_GFH06874.1_1351 HaLaN_01588, GFH06874 Proteasome subunit alpha type 0.02 OrthoFinder
lcl|LHPG02000022.1_cds_PRW20644.1_5225 PRW20644 Proteasome subunit alpha type-6 0.03 OrthoFinder
lcl|VRMN01000010.1_cds_KAA8492128.1_5311 KAA8492128 Proteasome subunit alpha type-6 0.05 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0004298 threonine-type endopeptidase activity IEA Interproscan
CC GO:0005839 proteasome core complex IEA Interproscan
Type GO Term Name Evidence Source
CC GO:0000502 proteasome complex IEP Enrichment
MF GO:0003712 transcription coregulator activity IEP Enrichment
MF GO:0004843 thiol-dependent deubiquitinase IEP Enrichment
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Enrichment
BP GO:0006508 proteolysis IEP Enrichment
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Enrichment
BP GO:0006553 lysine metabolic process IEP Enrichment
BP GO:0006605 protein targeting IEP Enrichment
BP GO:0006612 protein targeting to membrane IEP Enrichment
BP GO:0006613 cotranslational protein targeting to membrane IEP Enrichment
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP Enrichment
BP GO:0006886 intracellular protein transport IEP Enrichment
BP GO:0008104 protein localization IEP Enrichment
MF GO:0008242 omega peptidase activity IEP Enrichment
MF GO:0008312 7S RNA binding IEP Enrichment
MF GO:0008839 4-hydroxy-tetrahydrodipicolinate reductase IEP Enrichment
BP GO:0009056 catabolic process IEP Enrichment
BP GO:0009057 macromolecule catabolic process IEP Enrichment
BP GO:0009066 aspartate family amino acid metabolic process IEP Enrichment
BP GO:0009067 aspartate family amino acid biosynthetic process IEP Enrichment
BP GO:0009085 lysine biosynthetic process IEP Enrichment
BP GO:0009089 lysine biosynthetic process via diaminopimelate IEP Enrichment
BP GO:0015031 protein transport IEP Enrichment
MF GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor IEP Enrichment
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP Enrichment
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Enrichment
BP GO:0019941 modification-dependent protein catabolic process IEP Enrichment
CC GO:0030117 membrane coat IEP Enrichment
CC GO:0030118 clathrin coat IEP Enrichment
CC GO:0030120 vesicle coat IEP Enrichment
CC GO:0030125 clathrin vesicle coat IEP Enrichment
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEP Enrichment
MF GO:0030234 enzyme regulator activity IEP Enrichment
BP GO:0033036 macromolecule localization IEP Enrichment
BP GO:0033365 protein localization to organelle IEP Enrichment
BP GO:0034613 cellular protein localization IEP Enrichment
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Enrichment
BP GO:0043648 dicarboxylic acid metabolic process IEP Enrichment
BP GO:0044248 cellular catabolic process IEP Enrichment
BP GO:0044265 cellular macromolecule catabolic process IEP Enrichment
BP GO:0045047 protein targeting to ER IEP Enrichment
BP GO:0045184 establishment of protein localization IEP Enrichment
BP GO:0046451 diaminopimelate metabolic process IEP Enrichment
BP GO:0046907 intracellular transport IEP Enrichment
CC GO:0048500 signal recognition particle IEP Enrichment
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Enrichment
BP GO:0051641 cellular localization IEP Enrichment
BP GO:0051649 establishment of localization in cell IEP Enrichment
BP GO:0051668 localization within membrane IEP Enrichment
BP GO:0070727 cellular macromolecule localization IEP Enrichment
BP GO:0070972 protein localization to endoplasmic reticulum IEP Enrichment
BP GO:0071702 organic substance transport IEP Enrichment
BP GO:0071705 nitrogen compound transport IEP Enrichment
BP GO:0072594 establishment of protein localization to organelle IEP Enrichment
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP Enrichment
BP GO:0072657 protein localization to membrane IEP Enrichment
BP GO:0090150 establishment of protein localization to membrane IEP Enrichment
MF GO:0098772 molecular function regulator IEP Enrichment
MF GO:0101005 deubiquitinase activity IEP Enrichment
BP GO:1901575 organic substance catabolic process IEP Enrichment
BP GO:1901607 alpha-amino acid biosynthetic process IEP Enrichment
CC GO:1905368 peptidase complex IEP Enrichment
CC GO:1905369 endopeptidase complex IEP Enrichment
CC GO:1990904 ribonucleoprotein complex IEP Enrichment
InterPro domains Description Start Stop
IPR001353 Proteasome_sua/b 2 145
No external refs found!