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  5. Cz19g08080.t1

Cz19g08080.t1


Description : Retroviral aspartyl protease [Interproscan].


Gene families : OG_01_0000060 (OrthoFinder) Phylogenetic Tree(s): OG0000060_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: Cz19g08080.t1
Cluster HCCA: Cluster_75

Target Alias Description ECC score Gene Family Method Actions
Cz03g14150.t1 No alias Integrase zinc-binding domain; Integrase, catalytic... 0.06 OrthoFinder
Cz03g28140.t1 No alias Reverse transcriptase domain; Integrase zinc-binding... 0.05 OrthoFinder
Cz03g40130.t1 No alias Reverse transcriptase/retrotransposon-derived protein,... 0.11 OrthoFinder
Cz04g31300.t1 No alias Chromo domain [Interproscan]. 0.07 OrthoFinder
Cz05g14160.t1 No alias Retroviral aspartyl protease; Retrotransposon gag... 0.04 OrthoFinder
Cz06g22260.t1 No alias Hypothetical protein 0.08 OrthoFinder
Cz09g23160.t1 No alias Integrase zinc-binding domain; Integrase, catalytic... 0.06 OrthoFinder
Cz11g01040.t1 No alias Reverse transcriptase/retrotransposon-derived protein,... 0.05 OrthoFinder
UNPLg00342.t1 No alias Hypothetical protein 0.05 OrthoFinder
lcl|BLLF01001218.1_cds_GFH17889.1_12366 HaLaN_14611, GFH17889 Reverse transcriptase, RNase H-like domain; Reverse... 0.01 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8499396.1_8349 KAA8499396 Transposon Ty3-G Gag-Pol polyprotein 0.05 OrthoFinder
lcl|VRMN01000003.1_cds_KAA8495847.1_1845 KAA8495847 Transposon Ty3-G Gag-Pol polyprotein 0.05 OrthoFinder
lcl|VRMN01000004.1_cds_KAA8494421.1_2951 KAA8494421 Transposon Ty3-I Gag-Pol polyprotein 0.07 OrthoFinder
lcl|VRMN01000019.1_cds_KAA8490785.1_6041 KAA8490785 Transposon Ty3-G Gag-Pol polyprotein 0.05 OrthoFinder
lcl|VRMN01000023.1_cds_KAA8490537.1_5903 KAA8490537 Transposon Ty3-G Gag-Pol polyprotein 0.05 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005694 chromosome IEP Enrichment
BP GO:0006259 DNA metabolic process IEP Enrichment
BP GO:0015074 DNA integration IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment

No InterPro domains available for this sequence

No external refs found!