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  5. Cz19g07070.t1

Cz19g07070.t1


Description : DNA polymerase alpha/delta/epsilon, subunit B; DNA polymerase delta subunit, OB-fold domain [Interproscan].


Gene families : OG_01_0002490 (OrthoFinder) Phylogenetic Tree(s): OG0002490_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cz19g07070.t1
Cluster HCCA: Cluster_55

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000241.178 tig00000241_g21049.t1 Cell cycle.interphase.DNA replication.elongation.DNA... 0.02 OrthoFinder
Cre08.g374050 30774111 Cell cycle.interphase.DNA replication.elongation.DNA... 0.07 OrthoFinder
OT_12G00110.1 No alias DNA polymerase alpha/delta/epsilon, subunit B; DNA... 0.02 OrthoFinder
XM_002505166.1 MICPUN_86679, 86679 DNA polymerase alpha/delta/epsilon, subunit B; DNA... 0.07 OrthoFinder
XM_003060360.1 MicpuC2_19376, 19376 DNA polymerase alpha/delta/epsilon, subunit B; DNA... 0.06 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
BP GO:0006260 DNA replication IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000062 fatty-acyl-CoA binding IEP Enrichment
MF GO:0004190 aspartic-type endopeptidase activity IEP Enrichment
MF GO:0004478 methionine adenosyltransferase activity IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
CC GO:0005634 nucleus IEP Enrichment
BP GO:0006556 S-adenosylmethionine biosynthetic process IEP Enrichment
MF GO:0008170 N-methyltransferase activity IEP Enrichment
MF GO:0008276 protein methyltransferase activity IEP Enrichment
MF GO:0016278 lysine N-methyltransferase activity IEP Enrichment
MF GO:0016279 protein-lysine N-methyltransferase activity IEP Enrichment
BP GO:0016485 protein processing IEP Enrichment
MF GO:0018024 histone-lysine N-methyltransferase activity IEP Enrichment
CC GO:0030119 AP-type membrane coat adaptor complex IEP Enrichment
CC GO:0030131 clathrin adaptor complex IEP Enrichment
MF GO:0033218 amide binding IEP Enrichment
MF GO:0042054 histone methyltransferase activity IEP Enrichment
CC GO:0042575 DNA polymerase complex IEP Enrichment
CC GO:0043625 delta DNA polymerase complex IEP Enrichment
BP GO:0044272 sulfur compound biosynthetic process IEP Enrichment
BP GO:0046500 S-adenosylmethionine metabolic process IEP Enrichment
BP GO:0051604 protein maturation IEP Enrichment
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Enrichment
MF GO:0070001 aspartic-type peptidase activity IEP Enrichment
MF GO:0120227 acyl-CoA binding IEP Enrichment
MF GO:1901567 fatty acid derivative binding IEP Enrichment
MF GO:1901681 sulfur compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR007185 DNA_pol_a/d/e_bsu 210 419
IPR040663 DNA_pol_D_N 59 189
No external refs found!