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  5. Cz19g06110.t1

Cz19g06110.t1


Description : Ribosomal protein S9 [Interproscan].


Gene families : OG_01_0003842 (OrthoFinder) Phylogenetic Tree(s): OG0003842_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cz19g06110.t1
Cluster HCCA: Cluster_16

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000123.14 tig00000123_g6920.t1 Protein biosynthesis.cytosolic ribosome.small subunit... 0.07 OrthoFinder
Cre13.g573351 30784543 Protein biosynthesis.cytosolic ribosome.small subunit... 0.06 OrthoFinder
Dusal.0024s00015.1 33202210 Ribosomal protein S9 [Interproscan]. 0.06 OrthoFinder
OT_05G03950.1 No alias Ribosomal protein S9 [Interproscan]. 0.06 OrthoFinder
PTI_01G05180.1 No alias Ribosomal protein S9 [Interproscan]. 0.06 OrthoFinder
Sro245_g097460.1 Contig3087.g24617 40S ribosomal protein S16 0.07 OrthoFinder
TP04G04250.1 No alias Ribosomal protein S9 [Interproscan]. 0.07 OrthoFinder
Vocar.0001s0196.1 32884947 Ribosomal protein S9 [Interproscan]. 0.02 OrthoFinder
XM_002500943.1 MICPUN_93705, 93705 Ribosomal protein S9 [Interproscan]. 0.06 OrthoFinder
XM_003056840.1 MicpuC2_62402, 62402 Ribosomal protein S9 [Interproscan]. 0.03 OrthoFinder
lcl|BLLF01003005.1_cds_GFH26056.1_20533 HaLaN_24137, GFH26056 Ribosomal protein S9 [Interproscan]. 0.02 OrthoFinder
lcl|LHPG02000007.1_cds_PRW57188.1_8811 PRW57188 40S ribosomal S16 0.08 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8499795.1_8748 KAA8499795 40S ribosomal protein S16-1 0.05 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004637 phosphoribosylamine-glycine ligase activity IEP Enrichment
BP GO:0006099 tricarboxylic acid cycle IEP Enrichment
BP GO:0006144 purine nucleobase metabolic process IEP Enrichment
BP GO:0006457 protein folding IEP Enrichment
BP GO:0009112 nucleobase metabolic process IEP Enrichment
BP GO:0009113 purine nucleobase biosynthetic process IEP Enrichment
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
BP GO:0042440 pigment metabolic process IEP Enrichment
BP GO:0046112 nucleobase biosynthetic process IEP Enrichment
BP GO:0046148 pigment biosynthetic process IEP Enrichment
MF GO:0050661 NADP binding IEP Enrichment
InterPro domains Description Start Stop
IPR000754 Ribosomal_S9 5 103
No external refs found!