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  5. Cz19g04030.t1

Cz19g04030.t1


Description : rRNA-processing protein Efg1 [Interproscan].


Gene families : OG_01_0005850 (OrthoFinder) Phylogenetic Tree(s): OG0005850_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cz19g04030.t1
Cluster HCCA: Cluster_92

Target Alias Description ECC score Gene Family Method Actions
Cre10.g452600 30790670 No description available 0.05 OrthoFinder
OT_07G02130.1 No alias rRNA-processing protein Efg1 [Interproscan]. 0.05 OrthoFinder
Vocar.0004s0389.1 32889460 rRNA-processing protein Efg1 [Interproscan]. 0.02 OrthoFinder
XM_002499561.1 MICPUN_56097, 56097 rRNA-processing protein Efg1 [Interproscan]. 0.03 OrthoFinder
lcl|LHPG02000007.1_cds_PRW57271.1_9127 PRW57271 RRNA-processing EFG1 0.03 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0006364 rRNA processing IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP Enrichment
BP GO:0001522 pseudouridine synthesis IEP Enrichment
MF GO:0004470 malic enzyme activity IEP Enrichment
MF GO:0004471 malate dehydrogenase (decarboxylating) (NAD+) activity IEP Enrichment
MF GO:0004809 tRNA (guanine-N2-)-methyltransferase activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
CC GO:0005667 transcription regulator complex IEP Enrichment
CC GO:0005669 transcription factor TFIID complex IEP Enrichment
BP GO:0006352 DNA-templated transcription, initiation IEP Enrichment
BP GO:0006534 cysteine metabolic process IEP Enrichment
MF GO:0008170 N-methyltransferase activity IEP Enrichment
MF GO:0008173 RNA methyltransferase activity IEP Enrichment
MF GO:0008175 tRNA methyltransferase activity IEP Enrichment
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP Enrichment
BP GO:0009069 serine family amino acid metabolic process IEP Enrichment
BP GO:0009092 homoserine metabolic process IEP Enrichment
MF GO:0009982 pseudouridine synthase activity IEP Enrichment
MF GO:0016423 tRNA (guanine) methyltransferase activity IEP Enrichment
BP GO:0016579 protein deubiquitination IEP Enrichment
MF GO:0016615 malate dehydrogenase activity IEP Enrichment
BP GO:0019346 transsulfuration IEP Enrichment
BP GO:0030001 metal ion transport IEP Enrichment
CC GO:0030014 CCR4-NOT complex IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
BP GO:0043412 macromolecule modification IEP Enrichment
BP GO:0050667 homocysteine metabolic process IEP Enrichment
BP GO:0070646 protein modification by small protein removal IEP Enrichment
BP GO:0070647 protein modification by small protein conjugation or removal IEP Enrichment
CC GO:0090575 RNA polymerase II transcription regulator complex IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR019310 Efg1 35 144
No external refs found!