Cz19g01020.t1

Description : Hypothetical protein

Gene families : OG_01_0000507 (OrthoFinder) Phylogenetic Tree(s): OG0000507_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cz19g01020.t1
Cluster	HCCA: Cluster_106

Target	Alias	Description	ECC score	Gene Family Method
Sro212_g088220.1	Contig3756.g28805	Potential E3 ubiquitin-protein ligase ariadne-2	0.02	OrthoFinder
Transcript_contig_54036	54036	IBR domain [Interproscan].	0.02	OrthoFinder
Vocar.0024s0099.1	32890434	Zinc finger, C3HC4 RING-type; IBR domain [Interproscan].	0.02	OrthoFinder
lcl\|LHPG02000005.1_cds_PRW58138.1_7630	PRW58138	Putative E3 ubiquitin-ligase ARI8	0.03	OrthoFinder

Type	GO Term	Name	Evidence	Source
No GO annotation available for this sequence

Type	GO Term	Name	Evidence	Source
BP	GO:0000375	RNA splicing, via transesterification reactions	IEP	Enrichment
BP	GO:0000377	RNA splicing, via transesterification reactions with bulged adenosine as nucleophile	IEP	Enrichment
BP	GO:0000398	mRNA splicing, via spliceosome	IEP	Enrichment
MF	GO:0003682	chromatin binding	IEP	Enrichment
MF	GO:0003916	DNA topoisomerase activity	IEP	Enrichment
CC	GO:0005681	spliceosomal complex	IEP	Enrichment
CC	GO:0005694	chromosome	IEP	Enrichment
BP	GO:0006265	DNA topological change	IEP	Enrichment
BP	GO:0006396	RNA processing	IEP	Enrichment
MF	GO:0008138	protein tyrosine/serine/threonine phosphatase activity	IEP	Enrichment
BP	GO:0008380	RNA splicing	IEP	Enrichment
MF	GO:0016853	isomerase activity	IEP	Enrichment
MF	GO:0016879	ligase activity, forming carbon-nitrogen bonds	IEP	Enrichment
MF	GO:0016884	carbon-nitrogen ligase activity, with glutamine as amido-N-donor	IEP	Enrichment
BP	GO:0071103	DNA conformation change	IEP	Enrichment

No InterPro domains available for this sequence

External Links

No external refs found!