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  5. Cpa|evm.model.tig00001154.32

Cpa|evm.model.tig00001154.32 (tig00001154_g7296.t1)


Aliases : tig00001154_g7296.t1

No description available


Gene families : OG_01_0000003 (OrthoFinder) Phylogenetic Tree(s): OG0000003_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00001154.32
Cluster HCCA: Cluster_95

Target Alias Description ECC score Gene Family Method Actions
Cre09.g416100 30780886, DNJ11 Chaperone protein dnaJ 49 OS=Arabidopsis thaliana 0.04 OrthoFinder
Dusal.0186s00013.1 33200810 Hypothetical protein 0.01 OrthoFinder
Dusal.0658s00005.1 33202424 DnaJ domain [Interproscan]. 0.01 OrthoFinder
EOD26142 No alias DnaJ domain [Interproscan]. 0.02 OrthoFinder
OT_17G02140.1 No alias Ankyrin repeat-containing domain; DnaJ domain; Ankyrin... 0.02 OrthoFinder
SymbC1.scaffold4123.5 4123.5 DnaJ domain [Interproscan]. 0.01 OrthoFinder
Transcript_contig_55529 55529 DnaJ domain [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Enrichment
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Enrichment
BP GO:0000398 mRNA splicing, via spliceosome IEP Enrichment
MF GO:0003909 DNA ligase activity IEP Enrichment
MF GO:0003910 DNA ligase (ATP) activity IEP Enrichment
MF GO:0003924 GTPase activity IEP Enrichment
MF GO:0004298 threonine-type endopeptidase activity IEP Enrichment
CC GO:0005839 proteasome core complex IEP Enrichment
BP GO:0006397 mRNA processing IEP Enrichment
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Enrichment
MF GO:0008080 N-acetyltransferase activity IEP Enrichment
BP GO:0008380 RNA splicing IEP Enrichment
BP GO:0009056 catabolic process IEP Enrichment
BP GO:0009057 macromolecule catabolic process IEP Enrichment
BP GO:0016071 mRNA metabolic process IEP Enrichment
MF GO:0016407 acetyltransferase activity IEP Enrichment
MF GO:0016410 N-acyltransferase activity IEP Enrichment
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP Enrichment
BP GO:0019941 modification-dependent protein catabolic process IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Enrichment
BP GO:0044248 cellular catabolic process IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0044265 cellular macromolecule catabolic process IEP Enrichment
MF GO:0046983 protein dimerization activity IEP Enrichment
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Enrichment
MF GO:0070003 threonine-type peptidase activity IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
BP GO:1901575 organic substance catabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR001623 DnaJ_domain 9 71
IPR000504 RRM_dom 167 211
No external refs found!