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Description : Pre-mRNA-splicing factor 3; Domain of unknown function DUF1115 [Interproscan].
Gene families : OG_01_0003435 (OrthoFinder) Phylogenetic Tree(s): OG0003435_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Cz18g12030.t1 | |
| Cluster | HCCA: Cluster_39 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| XM_002507797.1 | MICPUN_60552, 60552 | U4/U6 small nuclear ribonucleoprotein Prp3 (PRP3) | 0.02 | OrthoFinder | |
| XM_003062154.1 | MicpuC2_70182, 70182 | U4/U6 small nuclear ribonucleoprotein Prp3 (PRP3) | 0.03 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000228 | nuclear chromosome | IEP | Enrichment |
| MF | GO:0003676 | nucleic acid binding | IEP | Enrichment |
| MF | GO:0003909 | DNA ligase activity | IEP | Enrichment |
| MF | GO:0003910 | DNA ligase (ATP) activity | IEP | Enrichment |
| MF | GO:0004527 | exonuclease activity | IEP | Enrichment |
| MF | GO:0005488 | binding | IEP | Enrichment |
| MF | GO:0005515 | protein binding | IEP | Enrichment |
| CC | GO:0005694 | chromosome | IEP | Enrichment |
| BP | GO:0006310 | DNA recombination | IEP | Enrichment |
| BP | GO:0006338 | chromatin remodeling | IEP | Enrichment |
| BP | GO:0006352 | DNA-templated transcription, initiation | IEP | Enrichment |
| BP | GO:0006367 | transcription initiation from RNA polymerase II promoter | IEP | Enrichment |
| BP | GO:0006886 | intracellular protein transport | IEP | Enrichment |
| BP | GO:0008104 | protein localization | IEP | Enrichment |
| MF | GO:0008641 | ubiquitin-like modifier activating enzyme activity | IEP | Enrichment |
| BP | GO:0015031 | protein transport | IEP | Enrichment |
| MF | GO:0016874 | ligase activity | IEP | Enrichment |
| MF | GO:0016877 | ligase activity, forming carbon-sulfur bonds | IEP | Enrichment |
| MF | GO:0016886 | ligase activity, forming phosphoric ester bonds | IEP | Enrichment |
| MF | GO:0017056 | structural constituent of nuclear pore | IEP | Enrichment |
| MF | GO:0017150 | tRNA dihydrouridine synthase activity | IEP | Enrichment |
| BP | GO:0033036 | macromolecule localization | IEP | Enrichment |
| CC | GO:0033177 | proton-transporting two-sector ATPase complex, proton-transporting domain | IEP | Enrichment |
| CC | GO:0033179 | proton-transporting V-type ATPase, V0 domain | IEP | Enrichment |
| BP | GO:0045184 | establishment of protein localization | IEP | Enrichment |
| BP | GO:0046907 | intracellular transport | IEP | Enrichment |
| BP | GO:0051641 | cellular localization | IEP | Enrichment |
| BP | GO:0051649 | establishment of localization in cell | IEP | Enrichment |
| BP | GO:0071702 | organic substance transport | IEP | Enrichment |
| BP | GO:0071705 | nitrogen compound transport | IEP | Enrichment |
| No external refs found! |