1. Home
  2. Species
  3. Chromochloris zofingiensis
  4. Sequence
  5. Cz18g11130.t1

Cz18g11130.t1


Description : Proteasome, subunit alpha/beta; Proteasome alpha-subunit, N-terminal domain [Interproscan].


Gene families : OG_01_0003165 (OrthoFinder) Phylogenetic Tree(s): OG0003165_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cz18g11130.t1
Cluster HCCA: Cluster_97

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001160.15 tig00001160_g7349.t1 Protein degradation.26S proteasome.20S core... 0.03 OrthoFinder
Cre17.g705400 30782060, POA1 Protein degradation.26S proteasome.20S core... 0.02 OrthoFinder
EOD10346 No alias Proteasome, subunit alpha/beta; Proteasome... 0.02 OrthoFinder
EOD29147 No alias Proteasome, subunit alpha/beta; Proteasome... 0.02 OrthoFinder
PTI_01G01300.1 No alias Proteasome, subunit alpha/beta; Proteasome... 0.04 OrthoFinder
Sro383_g131270.1 Contig132.g1492 Alpha type-6 0.03 OrthoFinder
TP19G00110.1 No alias Proteasome, subunit alpha/beta; Proteasome... 0.03 OrthoFinder
XM_002500765.1 MICPUN_107861, 107861 Proteasome, subunit alpha/beta; Proteasome... 0.04 OrthoFinder
XM_003059346.1 MicpuC2_49613, 49613 Proteasome, subunit alpha/beta; Proteasome... 0.02 OrthoFinder
lcl|VRMN01000010.1_cds_KAA8492128.1_5311 KAA8492128 Proteasome subunit alpha type-6 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEA Interproscan
MF GO:0004298 threonine-type endopeptidase activity IEA Interproscan
CC GO:0005839 proteasome core complex IEA Interproscan
BP GO:0006511 ubiquitin-dependent protein catabolic process IEA Interproscan
CC GO:0019773 proteasome core complex, alpha-subunit complex IEA Interproscan
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP Enrichment
CC GO:0000152 nuclear ubiquitin ligase complex IEP Enrichment
BP GO:0002949 tRNA threonylcarbamoyladenosine modification IEP Enrichment
MF GO:0004659 prenyltransferase activity IEP Enrichment
CC GO:0005680 anaphase-promoting complex IEP Enrichment
BP GO:0006354 DNA-templated transcription, elongation IEP Enrichment
BP GO:0006368 transcription elongation from RNA polymerase II promoter IEP Enrichment
BP GO:0006405 RNA export from nucleus IEP Enrichment
BP GO:0006406 mRNA export from nucleus IEP Enrichment
BP GO:0006488 dolichol-linked oligosaccharide biosynthetic process IEP Enrichment
BP GO:0006490 oligosaccharide-lipid intermediate biosynthetic process IEP Enrichment
BP GO:0006534 cysteine metabolic process IEP Enrichment
BP GO:0006553 lysine metabolic process IEP Enrichment
BP GO:0006913 nucleocytoplasmic transport IEP Enrichment
CC GO:0008023 transcription elongation factor complex IEP Enrichment
MF GO:0008318 protein prenyltransferase activity IEP Enrichment
CC GO:0008541 proteasome regulatory particle, lid subcomplex IEP Enrichment
MF GO:0008837 diaminopimelate epimerase activity IEP Enrichment
BP GO:0009069 serine family amino acid metabolic process IEP Enrichment
BP GO:0009085 lysine biosynthetic process IEP Enrichment
BP GO:0009089 lysine biosynthetic process via diaminopimelate IEP Enrichment
BP GO:0009092 homoserine metabolic process IEP Enrichment
CC GO:0015934 large ribosomal subunit IEP Enrichment
CC GO:0016593 Cdc73/Paf1 complex IEP Enrichment
MF GO:0016854 racemase and epimerase activity IEP Enrichment
MF GO:0016855 racemase and epimerase activity, acting on amino acids and derivatives IEP Enrichment
BP GO:0018342 protein prenylation IEP Enrichment
BP GO:0019346 transsulfuration IEP Enrichment
MF GO:0019899 enzyme binding IEP Enrichment
MF GO:0019955 cytokine binding IEP Enrichment
BP GO:0022900 electron transport chain IEP Enrichment
BP GO:0022904 respiratory electron transport chain IEP Enrichment
MF GO:0031072 heat shock protein binding IEP Enrichment
CC GO:0031461 cullin-RING ubiquitin ligase complex IEP Enrichment
MF GO:0031625 ubiquitin protein ligase binding IEP Enrichment
MF GO:0036361 racemase activity, acting on amino acids and derivatives IEP Enrichment
BP GO:0043248 proteasome assembly IEP Enrichment
BP GO:0043648 dicarboxylic acid metabolic process IEP Enrichment
MF GO:0044389 ubiquitin-like protein ligase binding IEP Enrichment
CC GO:0044391 ribosomal subunit IEP Enrichment
BP GO:0046451 diaminopimelate metabolic process IEP Enrichment
MF GO:0047661 amino-acid racemase activity IEP Enrichment
BP GO:0050657 nucleic acid transport IEP Enrichment
BP GO:0050658 RNA transport IEP Enrichment
BP GO:0050667 homocysteine metabolic process IEP Enrichment
BP GO:0051028 mRNA transport IEP Enrichment
BP GO:0051168 nuclear export IEP Enrichment
BP GO:0051169 nuclear transport IEP Enrichment
BP GO:0051236 establishment of RNA localization IEP Enrichment
BP GO:0070525 tRNA threonylcarbamoyladenosine metabolic process IEP Enrichment
BP GO:0097354 prenylation IEP Enrichment
CC GO:0140513 nuclear protein-containing complex IEP Enrichment
BP GO:1901605 alpha-amino acid metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR000426 Proteasome_asu_N 8 30
IPR001353 Proteasome_sua/b 34 219
No external refs found!