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  5. Cz18g03010.t1

Cz18g03010.t1


Description : Peptidase C19, ubiquitin carboxyl-terminal hydrolase; Ubiquitin-associated domain [Interproscan].


Gene families : OG_01_0002960 (OrthoFinder) Phylogenetic Tree(s): OG0002960_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cz18g03010.t1
Cluster HCCA: Cluster_48

Target Alias Description ECC score Gene Family Method Actions
Cre02.g080350 30786066 Protein degradation.peptidase families.cysteine-type... 0.03 OrthoFinder
lcl|LHPG02000001.1_cds_PRW61008.1_493 PRW61008 Ubiquitin carboxyl-terminal hydrolase 5 isoform X2 0.02 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0016579 protein deubiquitination IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003909 DNA ligase activity IEP Enrichment
MF GO:0003910 DNA ligase (ATP) activity IEP Enrichment
MF GO:0004843 thiol-dependent deubiquitinase IEP Enrichment
BP GO:0006310 DNA recombination IEP Enrichment
BP GO:0006766 vitamin metabolic process IEP Enrichment
BP GO:0006767 water-soluble vitamin metabolic process IEP Enrichment
BP GO:0006771 riboflavin metabolic process IEP Enrichment
BP GO:0006886 intracellular protein transport IEP Enrichment
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP Enrichment
BP GO:0008104 protein localization IEP Enrichment
MF GO:0008242 omega peptidase activity IEP Enrichment
MF GO:0008531 riboflavin kinase activity IEP Enrichment
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Enrichment
BP GO:0009110 vitamin biosynthetic process IEP Enrichment
BP GO:0009231 riboflavin biosynthetic process IEP Enrichment
BP GO:0009894 regulation of catabolic process IEP Enrichment
BP GO:0010608 posttranscriptional regulation of gene expression IEP Enrichment
BP GO:0015031 protein transport IEP Enrichment
MF GO:0016874 ligase activity IEP Enrichment
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Enrichment
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP Enrichment
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Enrichment
CC GO:0030117 membrane coat IEP Enrichment
CC GO:0030120 vesicle coat IEP Enrichment
CC GO:0030127 COPII vesicle coat IEP Enrichment
BP GO:0031329 regulation of cellular catabolic process IEP Enrichment
BP GO:0033036 macromolecule localization IEP Enrichment
BP GO:0042364 water-soluble vitamin biosynthetic process IEP Enrichment
BP GO:0042726 flavin-containing compound metabolic process IEP Enrichment
BP GO:0042727 flavin-containing compound biosynthetic process IEP Enrichment
BP GO:0043487 regulation of RNA stability IEP Enrichment
BP GO:0043488 regulation of mRNA stability IEP Enrichment
BP GO:0044528 regulation of mitochondrial mRNA stability IEP Enrichment
BP GO:0045184 establishment of protein localization IEP Enrichment
BP GO:0046907 intracellular transport IEP Enrichment
BP GO:0048193 Golgi vesicle transport IEP Enrichment
BP GO:0051641 cellular localization IEP Enrichment
BP GO:0051649 establishment of localization in cell IEP Enrichment
BP GO:0061013 regulation of mRNA catabolic process IEP Enrichment
BP GO:0071702 organic substance transport IEP Enrichment
BP GO:0071705 nitrogen compound transport IEP Enrichment
MF GO:0101005 deubiquitinase activity IEP Enrichment
BP GO:1903311 regulation of mRNA metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR015940 UBA 213 244
IPR015940 UBA 279 315
IPR001394 Peptidase_C19_UCH 59 414
No external refs found!