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  5. Cpa|evm.model.tig00001130.8

Cpa|evm.model.tig00001130.8 (tig00001130_g7237.t1)


Aliases : tig00001130_g7237.t1

No description available


Gene families : OG_01_0000020 (OrthoFinder) Phylogenetic Tree(s): OG0000020_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00001130.8
Cluster HCCA: Cluster_203

Target Alias Description ECC score Gene Family Method Actions
Transcript_contig_79616 79616 Regulator of chromosome condensation, RCC1 [Interproscan]. 0.01 OrthoFinder
XM_003055521.1 MicpuC2_37978, 37978 Regulator of chromosome condensation (RCC1) repeat;... 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003677 DNA binding IEP Enrichment
MF GO:0003690 double-stranded DNA binding IEP Enrichment
MF GO:0003697 single-stranded DNA binding IEP Enrichment
MF GO:0004197 cysteine-type endopeptidase activity IEP Enrichment
MF GO:0004417 hydroxyethylthiazole kinase activity IEP Enrichment
BP GO:0006298 mismatch repair IEP Enrichment
BP GO:0006508 proteolysis IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
MF GO:0030983 mismatched DNA binding IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR000408 Reg_chr_condens 87 135
IPR000408 Reg_chr_condens 164 210
IPR000408 Reg_chr_condens 37 81
IPR000408 Reg_chr_condens 213 264
IPR000408 Reg_chr_condens 266 304
No external refs found!