Description : NOT2/NOT3/NOT5, C-terminal [Interproscan].
Gene families : OG_01_0003749 (OrthoFinder) Phylogenetic Tree(s): OG0003749_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Cz17g16040.t1 | |
Cluster | HCCA: Cluster_157 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Cpa|evm.model.tig00020554.138 | tig00020554_g10917.t1 | RNA processing.RNA decay.deadenylation-dependent... | 0.02 | OrthoFinder |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0006355 | regulation of transcription, DNA-templated | IEA | Interproscan |
CC | GO:0042025 | host cell nucleus | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000290 | deadenylation-dependent decapping of nuclear-transcribed mRNA | IEP | Enrichment |
BP | GO:0000956 | nuclear-transcribed mRNA catabolic process | IEP | Enrichment |
MF | GO:0004540 | ribonuclease activity | IEP | Enrichment |
BP | GO:0006401 | RNA catabolic process | IEP | Enrichment |
BP | GO:0006402 | mRNA catabolic process | IEP | Enrichment |
BP | GO:0006810 | transport | IEP | Enrichment |
BP | GO:0006886 | intracellular protein transport | IEP | Enrichment |
BP | GO:0006888 | endoplasmic reticulum to Golgi vesicle-mediated transport | IEP | Enrichment |
MF | GO:0008047 | enzyme activator activity | IEP | Enrichment |
BP | GO:0009057 | macromolecule catabolic process | IEP | Enrichment |
BP | GO:0009892 | negative regulation of metabolic process | IEP | Enrichment |
BP | GO:0010605 | negative regulation of macromolecule metabolic process | IEP | Enrichment |
BP | GO:0010629 | negative regulation of gene expression | IEP | Enrichment |
BP | GO:0015031 | protein transport | IEP | Enrichment |
MF | GO:0015095 | magnesium ion transmembrane transporter activity | IEP | Enrichment |
BP | GO:0015693 | magnesium ion transport | IEP | Enrichment |
BP | GO:0016070 | RNA metabolic process | IEP | Enrichment |
BP | GO:0016071 | mRNA metabolic process | IEP | Enrichment |
BP | GO:0016192 | vesicle-mediated transport | IEP | Enrichment |
MF | GO:0016409 | palmitoyltransferase activity | IEP | Enrichment |
BP | GO:0019439 | aromatic compound catabolic process | IEP | Enrichment |
BP | GO:0030001 | metal ion transport | IEP | Enrichment |
CC | GO:0030117 | membrane coat | IEP | Enrichment |
CC | GO:0030120 | vesicle coat | IEP | Enrichment |
CC | GO:0030127 | COPII vesicle coat | IEP | Enrichment |
BP | GO:0034655 | nucleobase-containing compound catabolic process | IEP | Enrichment |
BP | GO:0043085 | positive regulation of catalytic activity | IEP | Enrichment |
BP | GO:0044093 | positive regulation of molecular function | IEP | Enrichment |
BP | GO:0044248 | cellular catabolic process | IEP | Enrichment |
BP | GO:0044265 | cellular macromolecule catabolic process | IEP | Enrichment |
BP | GO:0044270 | cellular nitrogen compound catabolic process | IEP | Enrichment |
BP | GO:0046700 | heterocycle catabolic process | IEP | Enrichment |
MF | GO:0046873 | metal ion transmembrane transporter activity | IEP | Enrichment |
BP | GO:0046907 | intracellular transport | IEP | Enrichment |
BP | GO:0048193 | Golgi vesicle transport | IEP | Enrichment |
BP | GO:0048519 | negative regulation of biological process | IEP | Enrichment |
BP | GO:0050790 | regulation of catalytic activity | IEP | Enrichment |
BP | GO:0051179 | localization | IEP | Enrichment |
BP | GO:0051234 | establishment of localization | IEP | Enrichment |
BP | GO:0051649 | establishment of localization in cell | IEP | Enrichment |
BP | GO:0065009 | regulation of molecular function | IEP | Enrichment |
BP | GO:0090304 | nucleic acid metabolic process | IEP | Enrichment |
BP | GO:0110154 | RNA decapping | IEP | Enrichment |
BP | GO:0110156 | methylguanosine-cap decapping | IEP | Enrichment |
BP | GO:1901361 | organic cyclic compound catabolic process | IEP | Enrichment |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR007282 | NOT2/3/5_C | 459 | 569 |
No external refs found! |