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  5. Cpa|evm.model.tig00001130.22

Cpa|evm.model.tig00001130.22 (tig00001130_g7252.t1)


Aliases : tig00001130_g7252.t1

Description : ABC transporter G family member 22 OS=Arabidopsis thaliana


Gene families : OG_01_0000021 (OrthoFinder) Phylogenetic Tree(s): OG0000021_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00001130.22
Cluster HCCA: Cluster_143

Target Alias Description ECC score Gene Family Method Actions
Cre01.g029900 30788563 No description available 0.02 OrthoFinder
Cre12.g547300 30793076 Solute transport.primary active transport.ABC... 0.02 OrthoFinder
Cz02g00110.t1 No alias ABC-2 type transporter; ABC transporter-like [Interproscan]. 0.02 OrthoFinder
Cz03g11100.t1 No alias ABC-2 type transporter; ABC transporter-like [Interproscan]. 0.02 OrthoFinder
OT_05G03580.1 No alias ABC-2 type transporter; ABC transporter-like [Interproscan]. 0.02 OrthoFinder
PTI_27G00030.1 No alias ABC transporter-like; ABC-2 type transporter [Interproscan]. 0.02 OrthoFinder
Sro14_g010700.1 Contig1128.g10819 Putative white-brown complex homolog protein 30 0.01 OrthoFinder
SymbC1.scaffold193.5 193.5 ABC-2 type transporter; ABC transporter-like [Interproscan]. 0.02 OrthoFinder
TP03G06240.1 No alias ABC transporter-like; ABC-2 type transporter [Interproscan]. 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
MF GO:0016887 ATPase IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000723 telomere maintenance IEP Enrichment
MF GO:0003678 DNA helicase activity IEP Enrichment
MF GO:0004386 helicase activity IEP Enrichment
MF GO:0004518 nuclease activity IEP Enrichment
MF GO:0004519 endonuclease activity IEP Enrichment
MF GO:0004521 endoribonuclease activity IEP Enrichment
MF GO:0004525 ribonuclease III activity IEP Enrichment
MF GO:0004540 ribonuclease activity IEP Enrichment
BP GO:0006996 organelle organization IEP Enrichment
MF GO:0008094 ATPase, acting on DNA IEP Enrichment
MF GO:0008168 methyltransferase activity IEP Enrichment
BP GO:0009314 response to radiation IEP Enrichment
BP GO:0009416 response to light stimulus IEP Enrichment
BP GO:0009581 detection of external stimulus IEP Enrichment
BP GO:0009582 detection of abiotic stimulus IEP Enrichment
BP GO:0009583 detection of light stimulus IEP Enrichment
BP GO:0009584 detection of visible light IEP Enrichment
BP GO:0009605 response to external stimulus IEP Enrichment
BP GO:0009628 response to abiotic stimulus IEP Enrichment
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP Enrichment
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Enrichment
BP GO:0018298 protein-chromophore linkage IEP Enrichment
BP GO:0032200 telomere organization IEP Enrichment
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP Enrichment
BP GO:0042592 homeostatic process IEP Enrichment
BP GO:0051276 chromosome organization IEP Enrichment
BP GO:0051606 detection of stimulus IEP Enrichment
BP GO:0060249 anatomical structure homeostasis IEP Enrichment
BP GO:0065008 regulation of biological quality IEP Enrichment
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 286 437
IPR000014 PAS 147 221
IPR013525 ABC_2_trans 557 622
IPR013525 ABC_2_trans 644 783
No external refs found!