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  5. Cz16g22050.t1

Cz16g22050.t1


Description : Clp ATPase, C-terminal; ATPase, AAA-type, core; Clp, N-terminal; ClpA/ClpB, AAA lid domain [Interproscan].


Gene families : OG_01_0000068 (OrthoFinder) Phylogenetic Tree(s): OG0000068_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cz16g22050.t1
Cluster HCCA: Cluster_98

Target Alias Description ECC score Gene Family Method Actions
Cre11.g467644 30775633, CLPB1 External stimuli response.temperature.Hsp... 0.03 OrthoFinder
Dusal.0384s00010.1 33195987 ATPase, AAA-type, core; Clp, N-terminal; Clp ATPase,... 0.03 OrthoFinder
Dusal.1244s00001.1 33189049 ATPase, AAA-type, core; ClpA/ClpB, AAA lid domain; Clp... 0.02 OrthoFinder
OT_01G00710.1 No alias ClpA/ClpB, AAA lid domain; Clp ATPase, C-terminal;... 0.03 OrthoFinder
PTI_03G05300.1 No alias ClpA/ClpB, AAA lid domain; Clp, N-terminal; ATPase,... 0.02 OrthoFinder
PTI_04G03480.1 No alias ClpA/ClpB, AAA lid domain; ATPase, AAA-type, core; Clp... 0.02 OrthoFinder
TP09G00210.1 No alias ATPase, AAA-type, core; Clp ATPase, C-terminal;... 0.02 OrthoFinder
TP22G00720.1 No alias ATPase, AAA-type, core; Clp ATPase, C-terminal;... 0.02 OrthoFinder
lcl|LHPG02000009.1_cds_PRW56139.1_10253 PRW56139 Chaperone 1 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003684 damaged DNA binding IEP Enrichment
MF GO:0003906 DNA-(apurinic or apyrimidinic site) endonuclease activity IEP Enrichment
MF GO:0004176 ATP-dependent peptidase activity IEP Enrichment
BP GO:0006284 base-excision repair IEP Enrichment
BP GO:0006289 nucleotide-excision repair IEP Enrichment
BP GO:0006525 arginine metabolic process IEP Enrichment
BP GO:0006527 arginine catabolic process IEP Enrichment
MF GO:0008270 zinc ion binding IEP Enrichment
MF GO:0008792 arginine decarboxylase activity IEP Enrichment
BP GO:0009063 cellular amino acid catabolic process IEP Enrichment
BP GO:0009064 glutamine family amino acid metabolic process IEP Enrichment
BP GO:0009065 glutamine family amino acid catabolic process IEP Enrichment
BP GO:0016054 organic acid catabolic process IEP Enrichment
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Enrichment
MF GO:0016887 ATPase IEP Enrichment
BP GO:0044282 small molecule catabolic process IEP Enrichment
BP GO:0046395 carboxylic acid catabolic process IEP Enrichment
BP GO:1901565 organonitrogen compound catabolic process IEP Enrichment
BP GO:1901606 alpha-amino acid catabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR003959 ATPase_AAA_core 597 774
IPR003959 ATPase_AAA_core 203 324
IPR019489 Clp_ATPase_C 781 860
IPR041546 ClpA/ClpB_AAA_lid 343 444
IPR004176 Clp_R_dom 18 49
IPR004176 Clp_R_dom 96 145
No external refs found!