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  5. Cz16g21070.t1

Cz16g21070.t1


Description : Ubiquitin-conjugating enzyme E2 [Interproscan].


Gene families : OG_01_0000421 (OrthoFinder) Phylogenetic Tree(s): OG0000421_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cz16g21070.t1
Cluster HCCA: Cluster_72

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020629.95 tig00020629_g12416.t1 Ubiquitin-conjugating enzyme E2 35 OS=Arabidopsis thaliana 0.04 OrthoFinder
Cre06.g292800 30779532 Protein degradation.peptide... 0.02 OrthoFinder
Cre16.g693700 30777449, UBC9 Protein degradation.peptide... 0.03 OrthoFinder
OT_05G02570.1 No alias Ubiquitin-conjugating enzyme E2 [Interproscan]. 0.03 OrthoFinder
Sro2183_g318050.1 Contig2199.g18316 Conjugating enzyme E2 0.01 OrthoFinder
SymbC1.scaffold6961.1 6961.1 Ubiquitin-conjugating enzyme E2 [Interproscan]. 0.01 OrthoFinder
TP04G00210.1 No alias Ubiquitin-conjugating enzyme E2 [Interproscan]. 0.02 OrthoFinder
Transcript_contig_58923 58923 Ubiquitin-conjugating enzyme E2 [Interproscan]. 0.01 OrthoFinder
Vocar.0001s1014.1 32884720 Ubiquitin-conjugating enzyme E2 [Interproscan]. 0.02 OrthoFinder
Vocar.0063s0025.1 32883460 Ubiquitin-conjugating enzyme E2 [Interproscan]. 0.04 OrthoFinder
XM_003056887.1 MicpuC2_46797, 46797 Ubiquitin-conjugating enzyme E2 [Interproscan]. 0.02 OrthoFinder
lcl|LHPG02000014.1_cds_PRW39297.1_2662 PRW39297 Ubiquitin-conjugating enzyme E2 28-like 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Enrichment
MF GO:0004298 threonine-type endopeptidase activity IEP Enrichment
MF GO:0005525 GTP binding IEP Enrichment
CC GO:0005839 proteasome core complex IEP Enrichment
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Enrichment
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Enrichment
MF GO:0019001 guanyl nucleotide binding IEP Enrichment
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP Enrichment
BP GO:0019941 modification-dependent protein catabolic process IEP Enrichment
MF GO:0032561 guanyl ribonucleotide binding IEP Enrichment
MF GO:0034062 5'-3' RNA polymerase activity IEP Enrichment
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Enrichment
BP GO:0044265 cellular macromolecule catabolic process IEP Enrichment
MF GO:0070003 threonine-type peptidase activity IEP Enrichment
MF GO:0097747 RNA polymerase activity IEP Enrichment
InterPro domains Description Start Stop
IPR000608 UBQ-conjugat_E2 5 141
No external refs found!