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  5. Cz16g15180.t1

Cz16g15180.t1


Description : ATPase, AAA-type, core [Interproscan].


Gene families : OG_01_0003725 (OrthoFinder) Phylogenetic Tree(s): OG0003725_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cz16g15180.t1
Cluster HCCA: Cluster_40

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00021357.12 tig00021357_g20745.t1 Cell cycle.interphase.DNA... 0.03 OrthoFinder
Cre06.g251800 30778780, RFC4 Cell cycle.interphase.DNA... 0.08 OrthoFinder
EOD29044 No alias ATPase, AAA-type, core [Interproscan]. 0.08 OrthoFinder
Sro262_g102000.1 Contig809.g9020 Factor C small subunit 0.01 OrthoFinder
Sro530_g161220.1 Contig4609.g34407 Factor C small subunit 0.01 OrthoFinder
Vocar.0015s0333.1 32899219 ATPase, AAA-type, core; Replication factor C, C-terminal... 0.03 OrthoFinder
XM_002506186.1 MICPUN_95914, 95914 Replication factor C, C-terminal; ATPase, AAA-type, core... 0.05 OrthoFinder
lcl|VRMN01000003.1_cds_KAA8495798.1_1796 KAA8495798 Replication factor C subunit 2 0.04 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000226 microtubule cytoskeleton organization IEP Enrichment
BP GO:0000723 telomere maintenance IEP Enrichment
MF GO:0003677 DNA binding IEP Enrichment
MF GO:0003690 double-stranded DNA binding IEP Enrichment
MF GO:0003924 GTPase activity IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
CC GO:0005694 chromosome IEP Enrichment
CC GO:0005875 microtubule associated complex IEP Enrichment
BP GO:0006259 DNA metabolic process IEP Enrichment
BP GO:0006260 DNA replication IEP Enrichment
BP GO:0006281 DNA repair IEP Enrichment
BP GO:0006298 mismatch repair IEP Enrichment
BP GO:0006310 DNA recombination IEP Enrichment
BP GO:0006950 response to stress IEP Enrichment
BP GO:0006974 cellular response to DNA damage stimulus IEP Enrichment
BP GO:0006996 organelle organization IEP Enrichment
BP GO:0007010 cytoskeleton organization IEP Enrichment
BP GO:0007017 microtubule-based process IEP Enrichment
BP GO:0007051 spindle organization IEP Enrichment
BP GO:0007062 sister chromatid cohesion IEP Enrichment
BP GO:0007064 mitotic sister chromatid cohesion IEP Enrichment
MF GO:0008092 cytoskeletal protein binding IEP Enrichment
MF GO:0015631 tubulin binding IEP Enrichment
BP GO:0016043 cellular component organization IEP Enrichment
MF GO:0016462 pyrophosphatase activity IEP Enrichment
BP GO:0016485 protein processing IEP Enrichment
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Enrichment
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Enrichment
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP Enrichment
MF GO:0017111 nucleoside-triphosphatase activity IEP Enrichment
BP GO:0022402 cell cycle process IEP Enrichment
BP GO:0022607 cellular component assembly IEP Enrichment
MF GO:0030983 mismatched DNA binding IEP Enrichment
BP GO:0032200 telomere organization IEP Enrichment
BP GO:0033554 cellular response to stress IEP Enrichment
MF GO:0043015 gamma-tubulin binding IEP Enrichment
BP GO:0043085 positive regulation of catalytic activity IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043228 non-membrane-bounded organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Enrichment
BP GO:0044093 positive regulation of molecular function IEP Enrichment
BP GO:0050790 regulation of catalytic activity IEP Enrichment
BP GO:0050896 response to stimulus IEP Enrichment
BP GO:0051225 spindle assembly IEP Enrichment
BP GO:0051276 chromosome organization IEP Enrichment
BP GO:0051716 cellular response to stimulus IEP Enrichment
BP GO:0060249 anatomical structure homeostasis IEP Enrichment
BP GO:0065009 regulation of molecular function IEP Enrichment
CC GO:0070652 HAUS complex IEP Enrichment
BP GO:0070925 organelle assembly IEP Enrichment
BP GO:0071840 cellular component organization or biogenesis IEP Enrichment
BP GO:1903047 mitotic cell cycle process IEP Enrichment
InterPro domains Description Start Stop
IPR003959 ATPase_AAA_core 41 166
No external refs found!