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  5. Cz16g13070.t1

Cz16g13070.t1


Description : Uroporphyrinogen decarboxylase (URO-D) [Interproscan].


Gene families : OG_01_0000468 (OrthoFinder) Phylogenetic Tree(s): OG0000468_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cz16g13070.t1
Cluster HCCA: Cluster_25

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00021319.48 tig00021319_g20242.t1 Coenzyme metabolism.tetrapyrrol... 0.06 OrthoFinder
Cre02.g073700 30785831, UPD3 Coenzyme metabolism.tetrapyrrol... 0.28 OrthoFinder
Cre02.g076300 30785008, UPD2 Coenzyme metabolism.tetrapyrrol... 0.21 OrthoFinder
Cre11.g467700 30776050, UPD1 Coenzyme metabolism.tetrapyrrol... 0.23 OrthoFinder
Dusal.0040s00025.1 33197281 Uroporphyrinogen decarboxylase (URO-D) [Interproscan]. 0.06 OrthoFinder
Dusal.0096s00026.1 33195840 Uroporphyrinogen decarboxylase (URO-D) [Interproscan]. 0.06 OrthoFinder
EOD08597 No alias Uroporphyrinogen decarboxylase [Ensembl]. 0.03 OrthoFinder
EOD39324 No alias Uroporphyrinogen decarboxylase [Ensembl]. 0.02 OrthoFinder
OT_01G03410.1 No alias Uroporphyrinogen decarboxylase (URO-D) [Interproscan]. 0.15 OrthoFinder
OT_12G02430.1 No alias Uroporphyrinogen decarboxylase (URO-D) [Interproscan]. 0.11 OrthoFinder
OT_17G00160.1 No alias Uroporphyrinogen decarboxylase (URO-D) [Interproscan]. 0.1 OrthoFinder
PTI_04G05280.1 No alias Uroporphyrinogen decarboxylase (URO-D) [Interproscan]. 0.1 OrthoFinder
PTI_10G00460.1 No alias Uroporphyrinogen decarboxylase (URO-D) [Interproscan]. 0.12 OrthoFinder
Sro1503_g278020.1 Contig1159.g11075 Uroporphyrinogen decarboxylase 0.11 OrthoFinder
Sro350_g123690.1 Contig1556.g14139 Uroporphyrinogen decarboxylase 0.1 OrthoFinder
Sro80_g043120.1 Contig92.g1056 Uroporphyrinogen decarboxylase 0.12 OrthoFinder
TP02G01280.1 No alias Uroporphyrinogen decarboxylase (URO-D) [Interproscan]. 0.09 OrthoFinder
TP03G09170.1 No alias Uroporphyrinogen decarboxylase (URO-D) [Interproscan]. 0.09 OrthoFinder
Transcript_contig_58561 58561 Uroporphyrinogen decarboxylase (URO-D) [Interproscan]. 0.05 OrthoFinder
Transcript_contig_59670 59670 Uroporphyrinogen decarboxylase (URO-D) [Interproscan]. 0.02 OrthoFinder
Transcript_contig_78240 78240 Uroporphyrinogen decarboxylase (URO-D) [Interproscan]. 0.01 OrthoFinder
Transcript_contig_89604 89604 Uroporphyrinogen decarboxylase (URO-D) [Interproscan]. 0.05 OrthoFinder
Vocar.0001s1599.1 32884605 Uroporphyrinogen decarboxylase (URO-D) [Interproscan]. 0.02 OrthoFinder
Vocar.0012s0224.1 32894830 Uroporphyrinogen decarboxylase (URO-D) [Interproscan]. 0.12 OrthoFinder
Vocar.0056s0027.1 32896685 Uroporphyrinogen decarboxylase (URO-D) [Interproscan]. 0.08 OrthoFinder
XM_002508574.1 MICPUN_104963, 104963 Uroporphyrinogen decarboxylase chloroplast precursor (HEME2) 0.1 OrthoFinder
XM_003055316.1 MicpuC2_49908, 49908 Uroporphyrinogen decarboxylase chloroplast precursor (HEME1) 0.08 OrthoFinder
XM_003064073.1 MicpuC2_23171, 23171 Uroporphyrinogen decarboxylase chloroplast precursor (HEME2) 0.11 OrthoFinder
lcl|BLLF01000412.1_cds_GFH11531.1_6008 HaLaN_07044, GFH11531 Uroporphyrinogen decarboxylase 0.08 OrthoFinder
lcl|BLLF01000728.1_cds_GFH14454.1_8931 HaLaN_10514, GFH14454 Uroporphyrinogen decarboxylase 0.11 OrthoFinder
lcl|BLLF01001154.1_cds_GFH17479.1_11956 HaLaN_14128, GFH17479 Uroporphyrinogen decarboxylase 0.03 OrthoFinder
lcl|LHPG02000011.1_cds_PRW45352.1_1514 PRW45352 Uroporphyrinogen decarboxylase chloroplast precursor 0.07 OrthoFinder
lcl|LHPG02000026.1_cds_PRW18323.1_5795 PRW18323 Uroporphyrinogen decarboxylase 0.09 OrthoFinder
lcl|VRMN01000002.1_cds_KAA8497188.1_917 KAA8497188 Uroporphyrinogen decarboxylase 0.04 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0004853 uroporphyrinogen decarboxylase activity IEA Interproscan
BP GO:0006779 porphyrin-containing compound biosynthetic process IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP Enrichment
MF GO:0004109 coproporphyrinogen oxidase activity IEP Enrichment
MF GO:0004418 hydroxymethylbilane synthase activity IEP Enrichment
MF GO:0004655 porphobilinogen synthase activity IEP Enrichment
MF GO:0004852 uroporphyrinogen-III synthase activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005509 calcium ion binding IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
BP GO:0006605 protein targeting IEP Enrichment
BP GO:0006612 protein targeting to membrane IEP Enrichment
BP GO:0006613 cotranslational protein targeting to membrane IEP Enrichment
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP Enrichment
BP GO:0006886 intracellular protein transport IEP Enrichment
MF GO:0008312 7S RNA binding IEP Enrichment
MF GO:0008483 transaminase activity IEP Enrichment
MF GO:0008883 glutamyl-tRNA reductase activity IEP Enrichment
MF GO:0009055 electron transfer activity IEP Enrichment
CC GO:0009521 photosystem IEP Enrichment
CC GO:0009522 photosystem I IEP Enrichment
CC GO:0009523 photosystem II IEP Enrichment
CC GO:0009538 photosystem I reaction center IEP Enrichment
CC GO:0009654 photosystem II oxygen evolving complex IEP Enrichment
BP GO:0010109 regulation of photosynthesis IEP Enrichment
BP GO:0010207 photosystem II assembly IEP Enrichment
MF GO:0010242 oxygen evolving activity IEP Enrichment
BP GO:0015979 photosynthesis IEP Enrichment
BP GO:0015994 chlorophyll metabolic process IEP Enrichment
BP GO:0015995 chlorophyll biosynthetic process IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Enrichment
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Enrichment
MF GO:0016634 oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor IEP Enrichment
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Enrichment
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Enrichment
MF GO:0016835 carbon-oxygen lyase activity IEP Enrichment
MF GO:0016836 hydro-lyase activity IEP Enrichment
CC GO:0019898 extrinsic component of membrane IEP Enrichment
BP GO:0022607 cellular component assembly IEP Enrichment
MF GO:0030145 manganese ion binding IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
BP GO:0033365 protein localization to organelle IEP Enrichment
BP GO:0034613 cellular protein localization IEP Enrichment
BP GO:0034622 cellular protein-containing complex assembly IEP Enrichment
BP GO:0042440 pigment metabolic process IEP Enrichment
BP GO:0042548 regulation of photosynthesis, light reaction IEP Enrichment
BP GO:0042549 photosystem II stabilization IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043169 cation binding IEP Enrichment
BP GO:0043467 regulation of generation of precursor metabolites and energy IEP Enrichment
MF GO:0043565 sequence-specific DNA binding IEP Enrichment
BP GO:0043933 protein-containing complex subunit organization IEP Enrichment
BP GO:0045047 protein targeting to ER IEP Enrichment
BP GO:0046148 pigment biosynthetic process IEP Enrichment
MF GO:0046406 magnesium protoporphyrin IX methyltransferase activity IEP Enrichment
MF GO:0046872 metal ion binding IEP Enrichment
CC GO:0048500 signal recognition particle IEP Enrichment
MF GO:0050660 flavin adenine dinucleotide binding IEP Enrichment
MF GO:0051536 iron-sulfur cluster binding IEP Enrichment
MF GO:0051540 metal cluster binding IEP Enrichment
BP GO:0051668 localization within membrane IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
BP GO:0065003 protein-containing complex assembly IEP Enrichment
BP GO:0070727 cellular macromolecule localization IEP Enrichment
BP GO:0070972 protein localization to endoplasmic reticulum IEP Enrichment
BP GO:0072594 establishment of protein localization to organelle IEP Enrichment
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP Enrichment
BP GO:0072657 protein localization to membrane IEP Enrichment
BP GO:0090150 establishment of protein localization to membrane IEP Enrichment
CC GO:0098796 membrane protein complex IEP Enrichment
CC GO:1902494 catalytic complex IEP Enrichment
CC GO:1990204 oxidoreductase complex IEP Enrichment
InterPro domains Description Start Stop
IPR000257 Uroporphyrinogen_deCOase 55 392
No external refs found!