Description : Zinc finger, RING-type [Interproscan].
Gene families : OG_01_0000005 (OrthoFinder) Phylogenetic Tree(s): OG0000005_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Cz16g11080.t1 | |
Cluster | HCCA: Cluster_30 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Cpa|evm.model.tig00000319.12 | tig00000319_g24123.t1 | No description available | 0.03 | OrthoFinder | |
Cz06g10040.t1 | No alias | Hypothetical protein | 0.02 | OrthoFinder | |
Dusal.0930s00003.1 | 33193956 | Zinc finger, RING-type [Interproscan]. | 0.03 | OrthoFinder | |
EOD31022 | No alias | Zinc finger, RING-type [Interproscan]. | 0.03 | OrthoFinder | |
EOD39290 | No alias | Zinc finger, RING-type [Interproscan]. | 0.05 | OrthoFinder | |
PTI_22G01940.1 | No alias | Zinc finger, RING-type [Interproscan]. | 0.01 | OrthoFinder | |
Sro40_g024590.1 | Contig335.g4466 | RING finger domain protein | 0.01 | OrthoFinder | |
Sro65_g036790.1 | Contig155.g1749 | Protein ligase Arkadia | 0.01 | OrthoFinder | |
TP22G02510.1 | No alias | Zinc finger, RING-type [Interproscan]. | 0.01 | OrthoFinder | |
lcl|VRMN01000002.1_cds_KAA8496988.1_717 | KAA8496988 | E3 ubiquitin-protein ligase | 0.02 | OrthoFinder |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003774 | motor activity | IEP | Enrichment |
MF | GO:0003777 | microtubule motor activity | IEP | Enrichment |
BP | GO:0006351 | transcription, DNA-templated | IEP | Enrichment |
BP | GO:0006366 | transcription by RNA polymerase II | IEP | Enrichment |
BP | GO:0006928 | movement of cell or subcellular component | IEP | Enrichment |
BP | GO:0007017 | microtubule-based process | IEP | Enrichment |
BP | GO:0007018 | microtubule-based movement | IEP | Enrichment |
MF | GO:0008017 | microtubule binding | IEP | Enrichment |
MF | GO:0008092 | cytoskeletal protein binding | IEP | Enrichment |
MF | GO:0008234 | cysteine-type peptidase activity | IEP | Enrichment |
MF | GO:0015631 | tubulin binding | IEP | Enrichment |
BP | GO:0032774 | RNA biosynthetic process | IEP | Enrichment |
BP | GO:0043170 | macromolecule metabolic process | IEP | Enrichment |
BP | GO:0097659 | nucleic acid-templated transcription | IEP | Enrichment |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR001841 | Znf_RING | 561 | 603 |
No external refs found! |