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  5. Cz16g08230.t1

Cz16g08230.t1


Description : Leucine-rich repeat [Interproscan].


Gene families : OG_01_0015788 (OrthoFinder) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cz16g08230.t1
Cluster HCCA: Cluster_136

Target Alias Description ECC score Gene Family Method Actions
Cre03.g188100 30787982 No description available 0.04 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP Enrichment
CC GO:0005576 extracellular region IEP Enrichment
BP GO:0006366 transcription by RNA polymerase II IEP Enrichment
BP GO:0006508 proteolysis IEP Enrichment
BP GO:0006810 transport IEP Enrichment
BP GO:0006812 cation transport IEP Enrichment
MF GO:0008200 ion channel inhibitor activity IEP Enrichment
MF GO:0008236 serine-type peptidase activity IEP Enrichment
BP GO:0009405 obsolete pathogenesis IEP Enrichment
MF GO:0015291 secondary active transmembrane transporter activity IEP Enrichment
MF GO:0015297 antiporter activity IEP Enrichment
MF GO:0015298 solute:cation antiporter activity IEP Enrichment
MF GO:0015299 solute:proton antiporter activity IEP Enrichment
MF GO:0016247 channel regulator activity IEP Enrichment
MF GO:0016248 channel inhibitor activity IEP Enrichment
MF GO:0017150 tRNA dihydrouridine synthase activity IEP Enrichment
MF GO:0017171 serine hydrolase activity IEP Enrichment
MF GO:0022804 active transmembrane transporter activity IEP Enrichment
BP GO:0051234 establishment of localization IEP Enrichment
BP GO:0051259 protein complex oligomerization IEP Enrichment
BP GO:0051260 protein homooligomerization IEP Enrichment
MF GO:0099106 ion channel regulator activity IEP Enrichment
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 194 215
IPR001611 Leu-rich_rpt 219 241
IPR001611 Leu-rich_rpt 759 781
IPR001611 Leu-rich_rpt 270 291
IPR001611 Leu-rich_rpt 635 651
IPR001611 Leu-rich_rpt 583 600
No external refs found!