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  5. Cz16g07080.t1

Cz16g07080.t1


Description : DEAD/DEAH box helicase domain [Interproscan].


Gene families : OG_01_0002068 (OrthoFinder) Phylogenetic Tree(s): OG0002068_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cz16g07080.t1
Cluster HCCA: Cluster_143

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020684.38 tig00020684_g12886.t1 DEAD-box ATP-dependent RNA helicase 18 OS=Oryza sativa... 0.02 OrthoFinder
Cre06.g282600 30779817 DEAD-box ATP-dependent RNA helicase 18 OS=Arabidopsis thaliana 0.06 OrthoFinder
OT_14G02060.1 No alias Helicase, C-terminal; Domain of unknown function... 0.04 OrthoFinder
PTI_02G04280.1 No alias Helicase, C-terminal; Domain of unknown function... 0.02 OrthoFinder
TP05G00180.1 No alias Domain of unknown function DUF4217; Helicase,... 0.02 OrthoFinder
lcl|VRMN01000002.1_cds_KAA8496903.1_632 KAA8496903 ATP-dependent RNA helicase DDX55 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006364 rRNA processing IEP Enrichment
BP GO:0006473 protein acetylation IEP Enrichment
BP GO:0006474 N-terminal protein amino acid acetylation IEP Enrichment
BP GO:0016072 rRNA metabolic process IEP Enrichment
BP GO:0017196 N-terminal peptidyl-methionine acetylation IEP Enrichment
BP GO:0018206 peptidyl-methionine modification IEP Enrichment
CC GO:0031248 protein acetyltransferase complex IEP Enrichment
BP GO:0031365 N-terminal protein amino acid modification IEP Enrichment
CC GO:0031414 N-terminal protein acetyltransferase complex IEP Enrichment
CC GO:0031417 NatC complex IEP Enrichment
BP GO:0043543 protein acylation IEP Enrichment
BP GO:0051604 protein maturation IEP Enrichment
CC GO:0140535 intracellular protein-containing complex IEP Enrichment
CC GO:1902493 acetyltransferase complex IEP Enrichment
CC GO:1990234 transferase complex IEP Enrichment
InterPro domains Description Start Stop
IPR011545 DEAD/DEAH_box_helicase_dom 12 134
No external refs found!