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  5. Cz16g05300.t1

Cz16g05300.t1


Description : WSTF/Acf1/Cbp146; Zinc finger, PHD-finger; WHIM2 domain [Interproscan].


Gene families : OG_01_0002128 (OrthoFinder) Phylogenetic Tree(s): OG0002128_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cz16g05300.t1
Cluster HCCA: Cluster_82

Target Alias Description ECC score Gene Family Method Actions
Cre16.g694208 30777574 No description available 0.05 OrthoFinder
Dusal.0492s00001.1 33202395 Hypothetical protein 0.05 OrthoFinder
Transcript_contig_55981 55981 WHIM2 domain [Interproscan]. 0.02 OrthoFinder
Transcript_contig_78949 78949 WSTF/Acf1/Cbp146; Zinc finger, PHD-finger; WHIM2 domain... 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003677 DNA binding IEP Enrichment
MF GO:0003682 chromatin binding IEP Enrichment
MF GO:0004576 oligosaccharyl transferase activity IEP Enrichment
MF GO:0005096 GTPase activator activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
CC GO:0005634 nucleus IEP Enrichment
BP GO:0006338 chromatin remodeling IEP Enrichment
MF GO:0008047 enzyme activator activity IEP Enrichment
BP GO:0016043 cellular component organization IEP Enrichment
MF GO:0016887 ATPase IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
MF GO:0030695 GTPase regulator activity IEP Enrichment
MF GO:0031491 nucleosome binding IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
BP GO:0043044 ATP-dependent chromatin remodeling IEP Enrichment
CC GO:0043227 membrane-bounded organelle IEP Enrichment
CC GO:0043231 intracellular membrane-bounded organelle IEP Enrichment
BP GO:0043248 proteasome assembly IEP Enrichment
MF GO:0044877 protein-containing complex binding IEP Enrichment
MF GO:0060090 molecular adaptor activity IEP Enrichment
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR013136 WSTF_Acf1_Cbp146 2 54
IPR028941 WHIM2_dom 1294 1361
IPR019787 Znf_PHD-finger 703 751
No external refs found!