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  5. Cz16g05140.t1

Cz16g05140.t1


Description : Translation elongation factor EFTu/EF1A, C-terminal; Translation elongation factor EFTu-like, domain 2; Transcription factor, GTP-binding domain [Interproscan].


Gene families : OG_01_0000147 (OrthoFinder) Phylogenetic Tree(s): OG0000147_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cz16g05140.t1
Cluster HCCA: Cluster_16

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00021352.57 tig00021352_g20724.t1 Protein biosynthesis.translation elongation.eEF1A... 0.04 OrthoFinder
Cre06.g284750 30779093, EFG3 Protein biosynthesis.translation termination.eRF3... 0.03 OrthoFinder
Cre12.g498600 30792534 Elongation factor 1-alpha OS=Glycine max 0.02 OrthoFinder
Dusal.0162s00022.1 33196140 Transcription factor, GTP-binding domain; Translation... 0.07 OrthoFinder
Dusal.0317s00001.1 33192309 Transcription factor, GTP-binding domain; Translation... 0.02 OrthoFinder
EOD28679 No alias Transcription factor, GTP-binding domain [Interproscan]. 0.02 OrthoFinder
EOD35459 No alias Putative EF-1 alpha/Tu like protein [Ensembl]. 0.04 OrthoFinder
OT_04G01520.1 No alias Translation elongation factor EFTu/EF1A, C-terminal;... 0.02 OrthoFinder
OT_13G02300.1 No alias Translation elongation factor EFTu/EF1A, C-terminal;... 0.04 OrthoFinder
PTI_03G01060.1 No alias Translation elongation factor EFTu-like, domain 2;... 0.02 OrthoFinder
PTI_13G03040.1 No alias Translation elongation factor EFTu-like, domain 2;... 0.06 OrthoFinder
SymbC1.scaffold16515.2 16515.2 Translation elongation factor EFTu/EF1A, C-terminal... 0.01 OrthoFinder
SymbC1.scaffold5097.1 5097.1 Transcription factor, GTP-binding domain [Interproscan]. 0.02 OrthoFinder
SymbC1.scaffold9283.4 9283.4 Transcription factor, GTP-binding domain [Interproscan]. 0.03 OrthoFinder
TP03G07980.1 No alias Translation elongation factor EFTu/EF1A, C-terminal;... 0.02 OrthoFinder
Vocar.0002s0002.1 32890872 Translation elongation factor EFTu/EF1A, C-terminal;... 0.03 OrthoFinder
Vocar.0002s0517.1 32891166 Translation elongation factor EFTu/EF1A, C-terminal;... 0.05 OrthoFinder
Vocar.0028s0032.1 32895657 Translation elongation factor EFTu/EF1A, C-terminal;... 0.02 OrthoFinder
XM_003060913.1 MicpuC2_49684, 49684 Transcription factor, GTP-binding domain; Translation... 0.02 OrthoFinder
lcl|LHPG02000005.1_cds_PRW58110.1_8184 PRW58110 Elongation factor 0.02 OrthoFinder
lcl|LHPG02000010.1_cds_PRW50937.1_1128 PRW50937 Eukaryotic translation elongation factor 1 alpha 2 0.04 OrthoFinder
lcl|LHPG02000010.1_cds_PRW51008.1_1130 PRW51008 Eukaryotic translation elongation factor 1 alpha 2 0.03 OrthoFinder
lcl|VRMN01000004.1_cds_KAA8494727.1_3257 KAA8494727 HBS1-like protein 0.02 OrthoFinder
lcl|VRMN01000004.1_cds_KAA8494988.1_3518 KAA8494988 Elongation factor 1-alpha 0.07 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000105 histidine biosynthetic process IEP Enrichment
BP GO:0001522 pseudouridine synthesis IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003697 single-stranded DNA binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003735 structural constituent of ribosome IEP Enrichment
MF GO:0003879 ATP phosphoribosyltransferase activity IEP Enrichment
MF GO:0003937 IMP cyclohydrolase activity IEP Enrichment
MF GO:0004486 methylenetetrahydrofolate dehydrogenase [NAD(P)+] activity IEP Enrichment
MF GO:0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity IEP Enrichment
MF GO:0004520 endodeoxyribonuclease activity IEP Enrichment
MF GO:0004531 deoxyribonuclease II activity IEP Enrichment
MF GO:0004536 deoxyribonuclease activity IEP Enrichment
MF GO:0004643 phosphoribosylaminoimidazolecarboxamide formyltransferase activity IEP Enrichment
MF GO:0005198 structural molecule activity IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
CC GO:0005840 ribosome IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006259 DNA metabolic process IEP Enrichment
BP GO:0006281 DNA repair IEP Enrichment
BP GO:0006298 mismatch repair IEP Enrichment
BP GO:0006412 translation IEP Enrichment
BP GO:0006518 peptide metabolic process IEP Enrichment
BP GO:0006520 cellular amino acid metabolic process IEP Enrichment
BP GO:0006547 histidine metabolic process IEP Enrichment
BP GO:0006725 cellular aromatic compound metabolic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
BP GO:0006950 response to stress IEP Enrichment
BP GO:0006974 cellular response to DNA damage stimulus IEP Enrichment
MF GO:0008097 5S rRNA binding IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
MF GO:0008410 CoA-transferase activity IEP Enrichment
BP GO:0009058 biosynthetic process IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
CC GO:0009507 chloroplast IEP Enrichment
CC GO:0009536 plastid IEP Enrichment
MF GO:0009982 pseudouridine synthase activity IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP Enrichment
MF GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor IEP Enrichment
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Enrichment
MF GO:0016742 hydroxymethyl-, formyl- and related transferase activity IEP Enrichment
MF GO:0016757 glycosyltransferase activity IEP Enrichment
MF GO:0016763 pentosyltransferase activity IEP Enrichment
MF GO:0016782 transferase activity, transferring sulphur-containing groups IEP Enrichment
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP Enrichment
MF GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines IEP Enrichment
MF GO:0016853 isomerase activity IEP Enrichment
MF GO:0016887 ATPase IEP Enrichment
MF GO:0016889 endodeoxyribonuclease activity, producing 3'-phosphomonoesters IEP Enrichment
MF GO:0016894 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters IEP Enrichment
MF GO:0019238 cyclohydrolase activity IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
CC GO:0019867 outer membrane IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0030983 mismatched DNA binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
BP GO:0033554 cellular response to stress IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0034645 cellular macromolecule biosynthetic process IEP Enrichment
BP GO:0043043 peptide biosynthetic process IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043228 non-membrane-bounded organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Enrichment
BP GO:0043603 cellular amide metabolic process IEP Enrichment
BP GO:0043604 amide biosynthetic process IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
BP GO:0044249 cellular biosynthetic process IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0044267 cellular protein metabolic process IEP Enrichment
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Enrichment
BP GO:0044281 small molecule metabolic process IEP Enrichment
BP GO:0046483 heterocycle metabolic process IEP Enrichment
BP GO:0050896 response to stimulus IEP Enrichment
BP GO:0051716 cellular response to stimulus IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
MF GO:0140097 catalytic activity, acting on DNA IEP Enrichment
BP GO:1901360 organic cyclic compound metabolic process IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
BP GO:1901566 organonitrogen compound biosynthetic process IEP Enrichment
BP GO:1901576 organic substance biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR004160 Transl_elong_EFTu/EF1A_C 353 460
IPR004161 EFTu-like_2 273 345
IPR000795 T_Tr_GTP-bd_dom 5 244
No external refs found!