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  4. Sequence
  5. Cz16g01010.t1

Cz16g01010.t1


Description : Minichromosome loss protein Mcl1, middle region; WD40 repeat [Interproscan].


Gene families : OG_01_0001835 (OrthoFinder) Phylogenetic Tree(s): OG0001835_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cz16g01010.t1
Cluster HCCA: Cluster_5

  • Target Alias Description ECC score Gene Family Method Actions
    Cpa|evm.model.tig00020780.19 tig00020780_g13772.t1 No description available 0.11 OrthoFinder
    Cre16.g652950 30777774 No description available 0.15 OrthoFinder
    EOD21019 No alias WD40 repeat; Minichromosome loss protein Mcl1, middle... 0.02 OrthoFinder
    EOD24691 No alias WD40 repeat; Minichromosome loss protein Mcl1, middle... 0.07 OrthoFinder
    OT_17G00940.1 No alias Minichromosome loss protein Mcl1, middle region; WD40... 0.1 OrthoFinder
    PTI_22G02380.1 No alias Minichromosome loss protein Mcl1, middle region [Interproscan]. 0.07 OrthoFinder
    PTI_22G02400.1 No alias Minichromosome loss protein Mcl1, middle region [Interproscan]. 0.07 OrthoFinder
    Sro88_g046690.1 Contig265.g3327 WD repeat and HMG-box DNA binding protein 1 0.04 OrthoFinder
    TP09G01570.1 No alias Minichromosome loss protein Mcl1, middle region [Interproscan]. 0.03 OrthoFinder
    Transcript_contig_56687 56687 Minichromosome loss protein Mcl1, middle region; WD40... 0.1 OrthoFinder
    Vocar.0032s0027.1 32893814 Minichromosome loss protein Mcl1, middle region; WD40... 0.05 OrthoFinder
    XM_002508806.1 MICPUN_62102, 62102 Minichromosome loss protein Mcl1, middle region; WD40... 0.12 OrthoFinder
    XM_003063935.1 MicpuC2_36835, 36835 Minichromosome loss protein Mcl1, middle region; WD40... 0.04 OrthoFinder
    lcl|BLLF01000281.1_cds_GFH10023.1_4500 HaLaN_05265, GFH10023 WD_REPEATS_REGION domain-containing protein 0.09 OrthoFinder
    lcl|BLLF01001243.1_cds_GFH18063.1_12540 HaLaN_14801, GFH18063 Hypothetical protein 0.08 OrthoFinder
    lcl|LHPG02000017.1_cds_PRW33253.1_3523 PRW33253 WD repeat and HMG-box DNA-binding 1 0.05 OrthoFinder
    lcl|VRMN01000018.1_cds_KAA8490900.1_5672 KAA8490900 Minichromosome loss protein 1 0.03 OrthoFinder

    Type GO Term Name Evidence Source
    MF GO:0005515 protein binding IEA Interproscan
    Toggle parental
    Type GO Term Name Evidence Source
    MF GO:0000166 nucleotide binding IEP Enrichment
    BP GO:0000278 mitotic cell cycle IEP Enrichment
    BP GO:0000725 recombinational repair IEP Enrichment
    CC GO:0000775 chromosome, centromeric region IEP Enrichment
    CC GO:0000808 origin recognition complex IEP Enrichment
    MF GO:0003676 nucleic acid binding IEP Enrichment
    MF GO:0003677 DNA binding IEP Enrichment
    MF GO:0003678 DNA helicase activity IEP Enrichment
    MF GO:0003682 chromatin binding IEP Enrichment
    MF GO:0003896 DNA primase activity IEP Enrichment
    MF GO:0003924 GTPase activity IEP Enrichment
    MF GO:0004386 helicase activity IEP Enrichment
    MF GO:0005524 ATP binding IEP Enrichment
    CC GO:0005634 nucleus IEP Enrichment
    BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
    BP GO:0006259 DNA metabolic process IEP Enrichment
    BP GO:0006260 DNA replication IEP Enrichment
    BP GO:0006269 DNA replication, synthesis of RNA primer IEP Enrichment
    BP GO:0006270 DNA replication initiation IEP Enrichment
    BP GO:0006275 regulation of DNA replication IEP Enrichment
    BP GO:0006281 DNA repair IEP Enrichment
    BP GO:0006310 DNA recombination IEP Enrichment
    BP GO:0006725 cellular aromatic compound metabolic process IEP Enrichment
    BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
    BP GO:0006950 response to stress IEP Enrichment
    BP GO:0006974 cellular response to DNA damage stimulus IEP Enrichment
    BP GO:0007049 cell cycle IEP Enrichment
    BP GO:0007062 sister chromatid cohesion IEP Enrichment
    BP GO:0007064 mitotic sister chromatid cohesion IEP Enrichment
    MF GO:0008092 cytoskeletal protein binding IEP Enrichment
    MF GO:0008094 ATPase, acting on DNA IEP Enrichment
    BP GO:0008150 biological_process IEP Enrichment
    BP GO:0008152 metabolic process IEP Enrichment
    BP GO:0009058 biosynthetic process IEP Enrichment
    BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
    BP GO:0009987 cellular process IEP Enrichment
    BP GO:0010639 negative regulation of organelle organization IEP Enrichment
    MF GO:0015631 tubulin binding IEP Enrichment
    MF GO:0016462 pyrophosphatase activity IEP Enrichment
    MF GO:0016787 hydrolase activity IEP Enrichment
    MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Enrichment
    MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Enrichment
    MF GO:0017076 purine nucleotide binding IEP Enrichment
    MF GO:0017111 nucleoside-triphosphatase activity IEP Enrichment
    MF GO:0030554 adenyl nucleotide binding IEP Enrichment
    CC GO:0031390 Ctf18 RFC-like complex IEP Enrichment
    MF GO:0032553 ribonucleotide binding IEP Enrichment
    MF GO:0032555 purine ribonucleotide binding IEP Enrichment
    MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
    BP GO:0032774 RNA biosynthetic process IEP Enrichment
    BP GO:0032780 negative regulation of ATPase activity IEP Enrichment
    CC GO:0032991 protein-containing complex IEP Enrichment
    BP GO:0033043 regulation of organelle organization IEP Enrichment
    BP GO:0033044 regulation of chromosome organization IEP Enrichment
    BP GO:0033554 cellular response to stress IEP Enrichment
    BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
    BP GO:0034645 cellular macromolecule biosynthetic process IEP Enrichment
    MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
    MF GO:0036094 small molecule binding IEP Enrichment
    CC GO:0042555 MCM complex IEP Enrichment
    MF GO:0043015 gamma-tubulin binding IEP Enrichment
    BP GO:0043086 negative regulation of catalytic activity IEP Enrichment
    MF GO:0043138 3'-5' DNA helicase activity IEP Enrichment
    MF GO:0043167 ion binding IEP Enrichment
    MF GO:0043168 anion binding IEP Enrichment
    BP GO:0043170 macromolecule metabolic process IEP Enrichment
    CC GO:0043226 organelle IEP Enrichment
    CC GO:0043227 membrane-bounded organelle IEP Enrichment
    CC GO:0043229 intracellular organelle IEP Enrichment
    CC GO:0043231 intracellular membrane-bounded organelle IEP Enrichment
    BP GO:0043462 regulation of ATPase activity IEP Enrichment
    BP GO:0044092 negative regulation of molecular function IEP Enrichment
    BP GO:0044237 cellular metabolic process IEP Enrichment
    BP GO:0044238 primary metabolic process IEP Enrichment
    BP GO:0044249 cellular biosynthetic process IEP Enrichment
    BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
    BP GO:0046483 heterocycle metabolic process IEP Enrichment
    BP GO:0048523 negative regulation of cellular process IEP Enrichment
    BP GO:0050790 regulation of catalytic activity IEP Enrichment
    BP GO:0050896 response to stimulus IEP Enrichment
    BP GO:0051095 regulation of helicase activity IEP Enrichment
    BP GO:0051097 negative regulation of helicase activity IEP Enrichment
    BP GO:0051128 regulation of cellular component organization IEP Enrichment
    BP GO:0051129 negative regulation of cellular component organization IEP Enrichment
    BP GO:0051716 cellular response to stimulus IEP Enrichment
    BP GO:0065009 regulation of molecular function IEP Enrichment
    BP GO:0071704 organic substance metabolic process IEP Enrichment
    BP GO:0090304 nucleic acid metabolic process IEP Enrichment
    MF GO:0097159 organic cyclic compound binding IEP Enrichment
    MF GO:0097367 carbohydrate derivative binding IEP Enrichment
    CC GO:0098687 chromosomal region IEP Enrichment
    MF GO:0140097 catalytic activity, acting on DNA IEP Enrichment
    MF GO:1901265 nucleoside phosphate binding IEP Enrichment
    BP GO:1901360 organic cyclic compound metabolic process IEP Enrichment
    MF GO:1901363 heterocyclic compound binding IEP Enrichment
    BP GO:1901576 organic substance biosynthetic process IEP Enrichment
    BP GO:1903047 mitotic cell cycle process IEP Enrichment
    BP GO:1905462 regulation of DNA duplex unwinding IEP Enrichment
    BP GO:1905463 negative regulation of DNA duplex unwinding IEP Enrichment
    BP GO:1905774 regulation of DNA helicase activity IEP Enrichment
    BP GO:1905775 negative regulation of DNA helicase activity IEP Enrichment
    BP GO:2001251 negative regulation of chromosome organization IEP Enrichment
    InterPro domains Description Start Stop
    IPR022100 Mcl1_mid 420 707
    IPR001680 WD40_repeat 230 261
    IPR001680 WD40_repeat 144 170
    No external refs found!