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  5. Cz15g20080.t1

Cz15g20080.t1


Description : Lon, substrate-binding domain; ATPase, AAA-type, core; Peptidase S16, Lon proteolytic domain [Interproscan].


Gene families : OG_01_0000907 (OrthoFinder) Phylogenetic Tree(s): OG0000907_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cz15g20080.t1
Cluster HCCA: Cluster_100

Target Alias Description ECC score Gene Family Method Actions
Dusal.0056s00020.1 33188766 ATPase, AAA-type, core; Peptidase S16, Lon proteolytic... 0.03 OrthoFinder
Sro23_g016060.1 Contig2259.g18756 Lon protease 0.01 OrthoFinder
SymbC1.scaffold172.68 172.68 Lon, substrate-binding domain; ATPase, AAA-type, core;... 0.02 OrthoFinder
SymbC1.scaffold6820.2 6820.2 Lon, substrate-binding domain; ATPase, AAA-type, core;... 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0004176 ATP-dependent peptidase activity IEA Interproscan
MF GO:0004252 serine-type endopeptidase activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0006508 proteolysis IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003909 DNA ligase activity IEP Enrichment
MF GO:0003910 DNA ligase (ATP) activity IEP Enrichment
MF GO:0003916 DNA topoisomerase activity IEP Enrichment
MF GO:0005215 transporter activity IEP Enrichment
MF GO:0005525 GTP binding IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006259 DNA metabolic process IEP Enrichment
BP GO:0006265 DNA topological change IEP Enrichment
BP GO:0006310 DNA recombination IEP Enrichment
BP GO:0006725 cellular aromatic compound metabolic process IEP Enrichment
MF GO:0009982 pseudouridine synthase activity IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
MF GO:0015399 primary active transmembrane transporter activity IEP Enrichment
CC GO:0016021 integral component of membrane IEP Enrichment
MF GO:0016851 magnesium chelatase activity IEP Enrichment
MF GO:0016853 isomerase activity IEP Enrichment
MF GO:0016866 intramolecular transferase activity IEP Enrichment
MF GO:0016874 ligase activity IEP Enrichment
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP Enrichment
MF GO:0019001 guanyl nucleotide binding IEP Enrichment
MF GO:0022804 active transmembrane transporter activity IEP Enrichment
MF GO:0022857 transmembrane transporter activity IEP Enrichment
MF GO:0031072 heat shock protein binding IEP Enrichment
CC GO:0031224 intrinsic component of membrane IEP Enrichment
MF GO:0032561 guanyl ribonucleotide binding IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP Enrichment
MF GO:0044877 protein-containing complex binding IEP Enrichment
BP GO:0046483 heterocycle metabolic process IEP Enrichment
MF GO:0051002 ligase activity, forming nitrogen-metal bonds IEP Enrichment
MF GO:0051003 ligase activity, forming nitrogen-metal bonds, forming coordination complexes IEP Enrichment
MF GO:0051082 unfolded protein binding IEP Enrichment
BP GO:0051276 chromosome organization IEP Enrichment
BP GO:0055085 transmembrane transport IEP Enrichment
BP GO:0071103 DNA conformation change IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
MF GO:0140097 catalytic activity, acting on DNA IEP Enrichment
BP GO:1901360 organic cyclic compound metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR003959 ATPase_AAA_core 479 617
IPR003111 Lon_substr-bd 103 326
IPR008269 Lon_proteolytic 839 1044
No external refs found!