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  5. Cpa|evm.model.tig00001110.8

Cpa|evm.model.tig00001110.8 (tig00001110_g7085.t1)


Aliases : tig00001110_g7085.t1

Description : RNA processing.RNA modification.dihydrouridylation.tRNA dihydrouridine synthase


Gene families : OG_01_0001153 (OrthoFinder) Phylogenetic Tree(s): OG0001153_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00001110.8
Cluster HCCA: Cluster_199

Target Alias Description ECC score Gene Family Method Actions
Cre12.g486900 30792022 RNA processing.RNA modification.dihydrouridylation.tRNA... 0.02 OrthoFinder
Vocar.0016s0140.1 32898144 tRNA-dihydrouridine synthase [Interproscan]. 0.02 OrthoFinder
XM_002503300.1 MICPUN_82497, 82497 TRNA-dihydrouridine synthase 0.02 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0008033 tRNA processing IEA Interproscan
MF GO:0017150 tRNA dihydrouridine synthase activity IEA Interproscan
MF GO:0050660 flavin adenine dinucleotide binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006400 tRNA modification IEP Enrichment
MF GO:0008173 RNA methyltransferase activity IEP Enrichment
MF GO:0008175 tRNA methyltransferase activity IEP Enrichment
MF GO:0008176 tRNA (guanine-N7-)-methyltransferase activity IEP Enrichment
MF GO:0008745 N-acetylmuramoyl-L-alanine amidase activity IEP Enrichment
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP Enrichment
MF GO:0016423 tRNA (guanine) methyltransferase activity IEP Enrichment
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP Enrichment
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP Enrichment
MF GO:0019842 vitamin binding IEP Enrichment
MF GO:0030170 pyridoxal phosphate binding IEP Enrichment
MF GO:0061783 peptidoglycan muralytic activity IEP Enrichment
MF GO:0070279 vitamin B6 binding IEP Enrichment
InterPro domains Description Start Stop
IPR001269 DUS_fam 33 260
No external refs found!