Cpa|evm.model.tig00001107.20 (tig00001107_g7104.t1)

Aliases : tig00001107_g7104.t1

Description : RuBisCO large subunit-binding protein subunit alpha, chloroplastic OS=Chlamydomonas reinhardtii

Gene families : OG_01_0000322 (OrthoFinder) Phylogenetic Tree(s): OG0000322_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cpa\|evm.model.tig00001107.20
Cluster	HCCA: Cluster_104

Target	Alias	Description	ECC score	Gene Family Method
Cre06.g309100	30779697, CPN60C	External stimuli response.temperature.Hsp...	0.03	OrthoFinder
Cz03g15060.t1	No alias	Chaperonin Cpn60/TCP-1 family [Interproscan].	0.01	OrthoFinder
Dusal.0055s00013.1	33187644	Chaperonin Cpn60/TCP-1 family [Interproscan].	0.02	OrthoFinder
Dusal.0817s00005.1	33195411	Chaperonin Cpn60/TCP-1 family [Interproscan].	0.02	OrthoFinder
SymbC1.scaffold11.172	11.172	Chaperonin Cpn60/TCP-1 family [Interproscan].	0.01	OrthoFinder
SymbC1.scaffold87.58	87.58	Chaperonin Cpn60/TCP-1 family; GroES chaperonin family...	0.01	OrthoFinder
lcl\|LHPG02000001.1_cds_PRW61355.1_600	PRW61355	Ru large subunit-binding subunit chloroplastic isoform B	0.01	OrthoFinder

Type	GO Term	Name	Evidence	Source
No GO annotation available for this sequence

Type	GO Term	Name	Evidence	Source
CC	GO:0000428	DNA-directed RNA polymerase complex	IEP	Enrichment
CC	GO:0005666	RNA polymerase III complex	IEP	Enrichment
CC	GO:0005783	endoplasmic reticulum	IEP	Enrichment
MF	GO:0010309	acireductone dioxygenase [iron(II)-requiring] activity	IEP	Enrichment
CC	GO:0030880	RNA polymerase complex	IEP	Enrichment
CC	GO:0055029	nuclear DNA-directed RNA polymerase complex	IEP	Enrichment
CC	GO:0061695	transferase complex, transferring phosphorus-containing groups	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR002423	Cpn60/TCP-1	18	476

External Links

No external refs found!