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  5. Cz14g18060.t1

Cz14g18060.t1


Description : RNA recognition motif domain [Interproscan].


Gene families : OG_01_0000048 (OrthoFinder) Phylogenetic Tree(s): OG0000048_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cz14g18060.t1
Cluster HCCA: Cluster_9

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00021433.15 tig00021433_g21269.t1 No description available 0.02 OrthoFinder
PTI_27G00310.1 No alias RNA recognition motif domain [Interproscan]. 0.03 OrthoFinder
Sro12_g009400.1 Contig2293.g18960 Trans isomerase E 0.02 OrthoFinder
lcl|BLLF01003429.1_cds_GFH27307.1_21784 HaLaN_25610, GFH27307 RRM domain-containing protein 0.02 OrthoFinder
lcl|BLLF01003769.1_cds_GFH28162.1_22639 HaLaN_26606, GFH28162 RRM domain-containing protein 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004107 chorismate synthase activity IEP Enrichment
MF GO:0004427 inorganic diphosphatase activity IEP Enrichment
BP GO:0006334 nucleosome assembly IEP Enrichment
BP GO:0009072 aromatic amino acid family metabolic process IEP Enrichment
BP GO:0009073 aromatic amino acid family biosynthetic process IEP Enrichment
MF GO:0009678 pyrophosphate hydrolysis-driven proton transmembrane transporter activity IEP Enrichment
MF GO:0016835 carbon-oxygen lyase activity IEP Enrichment
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Enrichment
MF GO:0022853 active ion transmembrane transporter activity IEP Enrichment
BP GO:0034728 nucleosome organization IEP Enrichment
MF GO:0050661 NADP binding IEP Enrichment
BP GO:0065004 protein-DNA complex assembly IEP Enrichment
BP GO:0071824 protein-DNA complex subunit organization IEP Enrichment
InterPro domains Description Start Stop
IPR000504 RRM_dom 5 74
No external refs found!