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  5. Cz14g18020.t1

Cz14g18020.t1


Description : WD40 repeat [Interproscan].


Gene families : OG_01_0000709 (OrthoFinder) Phylogenetic Tree(s): OG0000709_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cz14g18020.t1
Cluster HCCA: Cluster_30

Target Alias Description ECC score Gene Family Method Actions
EOD34958 No alias WD40 repeat [Interproscan]. 0.02 OrthoFinder
EOD39022 No alias Anaphase-promoting complex subunit 4, WD40 domain; WD40... 0.02 OrthoFinder
Sro589_g171680.1 Contig2898.g23105 Cycle protein 20 homolog 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006366 transcription by RNA polymerase II IEP Enrichment
BP GO:0006810 transport IEP Enrichment
BP GO:0006811 ion transport IEP Enrichment
BP GO:0030001 metal ion transport IEP Enrichment
MF GO:0030145 manganese ion binding IEP Enrichment
BP GO:0051179 localization IEP Enrichment
BP GO:0051234 establishment of localization IEP Enrichment
MF GO:0140096 catalytic activity, acting on a protein IEP Enrichment
InterPro domains Description Start Stop
IPR001680 WD40_repeat 359 393
IPR001680 WD40_repeat 285 311
IPR001680 WD40_repeat 488 524
IPR001680 WD40_repeat 402 439
No external refs found!