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Aliases : tig00001098_g7056.t1
Description : Protein degradation.26S proteasome.20S core protease.beta-type subunits.beta type-1 component
Gene families : OG_01_0001472 (OrthoFinder) Phylogenetic Tree(s): OG0001472_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Cpa|evm.model.tig00001098.5 | |
| Cluster | HCCA: Cluster_31 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cre06.g279000 | 30779585 | Protein degradation.26S proteasome.20S core... | 0.17 | OrthoFinder | |
| Cre12.g531100 | 30791746 | Protein degradation.26S proteasome.20S core... | 0.15 | OrthoFinder | |
| Cz09g26290.t1 | No alias | Proteasome, subunit alpha/beta [Interproscan]. | 0.03 | OrthoFinder | |
| Cz16g07050.t1 | No alias | Proteasome, subunit alpha/beta [Interproscan]. | 0.04 | OrthoFinder | |
| EOD14976 | No alias | Proteasome, subunit alpha/beta [Interproscan]. | 0.06 | OrthoFinder | |
| OT_14G00030.1 | No alias | Proteasome, subunit alpha/beta [Interproscan]. | 0.06 | OrthoFinder | |
| PTI_04G04470.1 | No alias | Proteasome, subunit alpha/beta [Interproscan]. | 0.12 | OrthoFinder | |
| Sro209_g087240.1 | Contig4070.g31195 | Beta type-6-A like protein | 0.17 | OrthoFinder | |
| TP04G06060.1 | No alias | Proteasome, subunit alpha/beta [Interproscan]. | 0.11 | OrthoFinder | |
| Transcript_contig_56963 | 56963 | Proteasome, subunit alpha/beta [Interproscan]. | 0.03 | OrthoFinder | |
| Vocar.0028s0084.1 | 32895721 | Proteasome, subunit alpha/beta [Interproscan]. | 0.02 | OrthoFinder | |
| XM_002503024.1 | MICPUN_59004, 59004 | Proteasome, subunit alpha/beta [Interproscan]. | 0.04 | OrthoFinder | |
| XM_003060786.1 | MicpuC2_44601, 44601 | Proteasome, subunit alpha/beta [Interproscan]. | 0.08 | OrthoFinder | |
| lcl|LHPG02000004.1_cds_PRW58965.1_6979 | PRW58965 | Proteasome subunit beta type-6 | 0.03 | OrthoFinder | |
| lcl|VRMN01000001.1_cds_KAA8497752.1_6705 | KAA8497752 | Proteasome subunit beta type-6 | 0.07 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004298 | threonine-type endopeptidase activity | IEA | Interproscan |
| CC | GO:0005839 | proteasome core complex | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000502 | proteasome complex | IEP | Enrichment |
| MF | GO:0003678 | DNA helicase activity | IEP | Enrichment |
| MF | GO:0003924 | GTPase activity | IEP | Enrichment |
| MF | GO:0004618 | phosphoglycerate kinase activity | IEP | Enrichment |
| BP | GO:0006090 | pyruvate metabolic process | IEP | Enrichment |
| BP | GO:0006091 | generation of precursor metabolites and energy | IEP | Enrichment |
| BP | GO:0006096 | glycolytic process | IEP | Enrichment |
| BP | GO:0006165 | nucleoside diphosphate phosphorylation | IEP | Enrichment |
| BP | GO:0006508 | proteolysis | IEP | Enrichment |
| BP | GO:0006511 | ubiquitin-dependent protein catabolic process | IEP | Enrichment |
| BP | GO:0006757 | ATP generation from ADP | IEP | Enrichment |
| BP | GO:0006888 | endoplasmic reticulum to Golgi vesicle-mediated transport | IEP | Enrichment |
| BP | GO:0008380 | RNA splicing | IEP | Enrichment |
| BP | GO:0009056 | catabolic process | IEP | Enrichment |
| BP | GO:0009057 | macromolecule catabolic process | IEP | Enrichment |
| BP | GO:0009132 | nucleoside diphosphate metabolic process | IEP | Enrichment |
| BP | GO:0009135 | purine nucleoside diphosphate metabolic process | IEP | Enrichment |
| BP | GO:0009179 | purine ribonucleoside diphosphate metabolic process | IEP | Enrichment |
| BP | GO:0009185 | ribonucleoside diphosphate metabolic process | IEP | Enrichment |
| BP | GO:0016052 | carbohydrate catabolic process | IEP | Enrichment |
| MF | GO:0016462 | pyrophosphatase activity | IEP | Enrichment |
| MF | GO:0016774 | phosphotransferase activity, carboxyl group as acceptor | IEP | Enrichment |
| MF | GO:0016817 | hydrolase activity, acting on acid anhydrides | IEP | Enrichment |
| MF | GO:0016818 | hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | IEP | Enrichment |
| MF | GO:0017111 | nucleoside-triphosphatase activity | IEP | Enrichment |
| CC | GO:0019773 | proteasome core complex, alpha-subunit complex | IEP | Enrichment |
| BP | GO:0019941 | modification-dependent protein catabolic process | IEP | Enrichment |
| CC | GO:0034464 | BBSome | IEP | Enrichment |
| BP | GO:0043632 | modification-dependent macromolecule catabolic process | IEP | Enrichment |
| BP | GO:0044248 | cellular catabolic process | IEP | Enrichment |
| BP | GO:0044265 | cellular macromolecule catabolic process | IEP | Enrichment |
| BP | GO:0046031 | ADP metabolic process | IEP | Enrichment |
| BP | GO:0046907 | intracellular transport | IEP | Enrichment |
| BP | GO:0046939 | nucleotide phosphorylation | IEP | Enrichment |
| BP | GO:0048193 | Golgi vesicle transport | IEP | Enrichment |
| BP | GO:0051603 | proteolysis involved in cellular protein catabolic process | IEP | Enrichment |
| BP | GO:0051641 | cellular localization | IEP | Enrichment |
| BP | GO:0051649 | establishment of localization in cell | IEP | Enrichment |
| BP | GO:1901575 | organic substance catabolic process | IEP | Enrichment |
| CC | GO:1905368 | peptidase complex | IEP | Enrichment |
| CC | GO:1905369 | endopeptidase complex | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001353 | Proteasome_sua/b | 64 | 244 |
| No external refs found! |