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  5. Cz14g00180.t1

Cz14g00180.t1


Description : AAA ATPase, AAA+ lid domain; Proteasomal ATPase OB C-terminal domain; ATPase, AAA-type, core [Interproscan].


Gene families : OG_01_0002743 (OrthoFinder) Phylogenetic Tree(s): OG0002743_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cz14g00180.t1
Cluster HCCA: Cluster_139

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001042.6 tig00001042_g6583.t1 Protein degradation.26S proteasome.regulatory... 0.07 OrthoFinder
Cre07.g329700 30774542, RPT2 Protein degradation.26S proteasome.regulatory... 0.1 OrthoFinder
EOD21334 No alias Proteasomal ATPase OB C-terminal domain; AAA ATPase,... 0.06 OrthoFinder
OT_03G02920.1 No alias Proteasomal ATPase OB C-terminal domain; ATPase,... 0.02 OrthoFinder
PTI_03G00970.1 No alias Proteasomal ATPase OB C-terminal domain; AAA ATPase,... 0.08 OrthoFinder
Sro35_g022630.1 Contig3323.g26140 26S proteasome regulatory subunit 4 0.11 OrthoFinder
TP01G06520.1 No alias Proteasomal ATPase OB C-terminal domain; ATPase,... 0.06 OrthoFinder
Vocar.0017s0200.1 32891504 Proteasomal ATPase OB C-terminal domain; ATPase,... 0.04 OrthoFinder
XM_002501574.1 MICPUN_106840, 106840 Proteasomal ATPase OB C-terminal domain; AAA ATPase,... 0.09 OrthoFinder
XM_003062509.1 MicpuC2_49715, 49715 Proteasomal ATPase OB C-terminal domain; ATPase,... 0.02 OrthoFinder
lcl|BLLF01000228.1_cds_GFH09364.1_3841 HaLaN_04486, GFH09364 26S proteasome regulatory subunit 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000439 transcription factor TFIIH core complex IEP Enrichment
BP GO:0000469 cleavage involved in rRNA processing IEP Enrichment
MF GO:0001671 ATPase activator activity IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0004175 endopeptidase activity IEP Enrichment
MF GO:0004298 threonine-type endopeptidase activity IEP Enrichment
MF GO:0004659 prenyltransferase activity IEP Enrichment
MF GO:0004843 thiol-dependent deubiquitinase IEP Enrichment
MF GO:0005525 GTP binding IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
CC GO:0005667 transcription regulator complex IEP Enrichment
CC GO:0005787 signal peptidase complex IEP Enrichment
CC GO:0005839 proteasome core complex IEP Enrichment
BP GO:0006289 nucleotide-excision repair IEP Enrichment
BP GO:0006405 RNA export from nucleus IEP Enrichment
BP GO:0006406 mRNA export from nucleus IEP Enrichment
BP GO:0006465 signal peptide processing IEP Enrichment
BP GO:0006508 proteolysis IEP Enrichment
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
BP GO:0006913 nucleocytoplasmic transport IEP Enrichment
MF GO:0008047 enzyme activator activity IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
MF GO:0008233 peptidase activity IEP Enrichment
MF GO:0008242 omega peptidase activity IEP Enrichment
MF GO:0008318 protein prenyltransferase activity IEP Enrichment
CC GO:0008541 proteasome regulatory particle, lid subcomplex IEP Enrichment
BP GO:0009056 catabolic process IEP Enrichment
BP GO:0009057 macromolecule catabolic process IEP Enrichment
CC GO:0016021 integral component of membrane IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
BP GO:0018342 protein prenylation IEP Enrichment
MF GO:0019001 guanyl nucleotide binding IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP Enrichment
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Enrichment
MF GO:0019899 enzyme binding IEP Enrichment
BP GO:0019941 modification-dependent protein catabolic process IEP Enrichment
MF GO:0030234 enzyme regulator activity IEP Enrichment
CC GO:0031224 intrinsic component of membrane IEP Enrichment
MF GO:0031625 ubiquitin protein ligase binding IEP Enrichment
MF GO:0032561 guanyl ribonucleotide binding IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
BP GO:0043248 proteasome assembly IEP Enrichment
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
BP GO:0044248 cellular catabolic process IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0044265 cellular macromolecule catabolic process IEP Enrichment
MF GO:0044389 ubiquitin-like protein ligase binding IEP Enrichment
MF GO:0046912 acyltransferase, acyl groups converted into alkyl on transfer IEP Enrichment
BP GO:0050657 nucleic acid transport IEP Enrichment
BP GO:0050658 RNA transport IEP Enrichment
BP GO:0051028 mRNA transport IEP Enrichment
MF GO:0051087 chaperone binding IEP Enrichment
BP GO:0051168 nuclear export IEP Enrichment
BP GO:0051169 nuclear transport IEP Enrichment
BP GO:0051236 establishment of RNA localization IEP Enrichment
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Enrichment
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Enrichment
MF GO:0060590 ATPase regulator activity IEP Enrichment
MF GO:0070003 threonine-type peptidase activity IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
BP GO:0090305 nucleic acid phosphodiester bond hydrolysis IEP Enrichment
BP GO:0090501 RNA phosphodiester bond hydrolysis IEP Enrichment
CC GO:0090575 RNA polymerase II transcription regulator complex IEP Enrichment
BP GO:0097354 prenylation IEP Enrichment
MF GO:0098772 molecular function regulator IEP Enrichment
MF GO:0101005 deubiquitinase activity IEP Enrichment
MF GO:0140096 catalytic activity, acting on a protein IEP Enrichment
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
BP GO:1901575 organic substance catabolic process IEP Enrichment
CC GO:1905368 peptidase complex IEP Enrichment
InterPro domains Description Start Stop
IPR003959 ATPase_AAA_core 229 362
IPR041569 AAA_lid_3 384 428
IPR032501 Prot_ATP_ID_OB 116 170
No external refs found!