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  5. Cz13g17160.t1

Cz13g17160.t1


Description : Syntaxin-5, N-terminal, Sly1p-binding domain; Target SNARE coiled-coil homology domain [Interproscan].


Gene families : OG_01_0003160 (OrthoFinder) Phylogenetic Tree(s): OG0003160_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cz13g17160.t1
Cluster HCCA: Cluster_72

Target Alias Description ECC score Gene Family Method Actions
Cre16.g692050 30778217 Vesicle trafficking.SNARE target membrane recognition... 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000813 ESCRT I complex IEP Enrichment
MF GO:0004408 holocytochrome-c synthase activity IEP Enrichment
CC GO:0005739 mitochondrion IEP Enrichment
BP GO:0016197 endosomal transport IEP Enrichment
MF GO:0016603 glutaminyl-peptide cyclotransferase activity IEP Enrichment
MF GO:0016755 aminoacyltransferase activity IEP Enrichment
MF GO:0016846 carbon-sulfur lyase activity IEP Enrichment
BP GO:0017186 peptidyl-pyroglutamic acid biosynthetic process, using glutaminyl-peptide cyclotransferase IEP Enrichment
BP GO:0018199 peptidyl-glutamine modification IEP Enrichment
BP GO:0032509 endosome transport via multivesicular body sorting pathway IEP Enrichment
CC GO:0036452 ESCRT complex IEP Enrichment
BP GO:0071985 multivesicular body sorting pathway IEP Enrichment
InterPro domains Description Start Stop
IPR000727 T_SNARE_dom 260 312
IPR021538 Syntaxin-5_N 5 26
No external refs found!