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  5. Cz13g14230.t1

Cz13g14230.t1


Description : Ribosomal protein L24 [Interproscan].


Gene families : OG_01_0001143 (OrthoFinder) Phylogenetic Tree(s): OG0001143_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cz13g14230.t1
Cluster HCCA: Cluster_54

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000455.16 tig00000455_g1004.t1 No description available 0.03 OrthoFinder
Cre07.g330450 30774865 Protein biosynthesis.organelle translation... 0.02 OrthoFinder
Cre16.g652550 30778177, PRPL24 Protein biosynthesis.organelle translation... 0.21 OrthoFinder
Dusal.0030s00023.1 33195298 KOW; Ribosomal protein L24 [Interproscan]. 0.03 OrthoFinder
Dusal.0336s00012.1 33190830 Hypothetical protein 0.03 OrthoFinder
EOD09147 No alias Ribosomal protein L24 [Interproscan]. 0.02 OrthoFinder
EOD36197 No alias Ribosomal protein L24 [Interproscan]. 0.03 OrthoFinder
EOD38740 No alias Ribosomal protein L24 [Interproscan]. 0.02 OrthoFinder
OT_11G00790.1 No alias Ribosomal protein L24 [Interproscan]. 0.13 OrthoFinder
PTI_15G01360.1 No alias Ribosomal protein L24 [Interproscan]. 0.01 OrthoFinder
Sro1177_g249450.1 Contig1274.g11886 Protein L24 0.04 OrthoFinder
Sro51_chlor_g029590.1 Rpl24 Rpl24 0.06 OrthoFinder
Vocar.0032s0031.1 32893715 Ribosomal protein L24; KOW [Interproscan]. 0.07 OrthoFinder
XM_002509009.1 MICPUN_109273, 109273 Ribosomal protein L24 [Interproscan]. 0.17 OrthoFinder
XM_003061663.1 MicpuC2_37566, 37566 Ribosomal protein L24 [Interproscan]. 0.04 OrthoFinder
lcl|BLLF01000635.1_cds_GFH13638.1_8115 HaLaN_09566, GFH13638 KOW domain-containing protein 0.12 OrthoFinder
lcl|LHPG02000022.1_cds_PRW20692.1_5226 PRW20692 50S ribosomal chloroplastic 0.12 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003746 translation elongation factor activity IEP Enrichment
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Enrichment
MF GO:0004177 aminopeptidase activity IEP Enrichment
MF GO:0004329 formate-tetrahydrofolate ligase activity IEP Enrichment
MF GO:0004751 ribose-5-phosphate isomerase activity IEP Enrichment
MF GO:0005261 cation channel activity IEP Enrichment
MF GO:0005509 calcium ion binding IEP Enrichment
BP GO:0006414 translational elongation IEP Enrichment
BP GO:0006729 tetrahydrobiopterin biosynthetic process IEP Enrichment
MF GO:0008124 4-alpha-hydroxytetrahydrobiopterin dehydratase activity IEP Enrichment
MF GO:0008238 exopeptidase activity IEP Enrichment
MF GO:0008942 nitrite reductase [NAD(P)H] activity IEP Enrichment
BP GO:0009052 pentose-phosphate shunt, non-oxidative branch IEP Enrichment
CC GO:0009507 chloroplast IEP Enrichment
CC GO:0009521 photosystem IEP Enrichment
CC GO:0009523 photosystem II IEP Enrichment
CC GO:0009536 plastid IEP Enrichment
CC GO:0009654 photosystem II oxygen evolving complex IEP Enrichment
BP GO:0010207 photosystem II assembly IEP Enrichment
MF GO:0015252 proton channel activity IEP Enrichment
BP GO:0015979 photosynthesis IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016661 oxidoreductase activity, acting on other nitrogenous compounds as donors IEP Enrichment
MF GO:0016742 hydroxymethyl-, formyl- and related transferase activity IEP Enrichment
MF GO:0016853 isomerase activity IEP Enrichment
MF GO:0016859 cis-trans isomerase activity IEP Enrichment
BP GO:0018193 peptidyl-amino acid modification IEP Enrichment
BP GO:0018208 peptidyl-proline modification IEP Enrichment
CC GO:0019898 extrinsic component of membrane IEP Enrichment
MF GO:0020037 heme binding IEP Enrichment
CC GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain IEP Enrichment
BP GO:0034311 diol metabolic process IEP Enrichment
BP GO:0034312 diol biosynthetic process IEP Enrichment
BP GO:0042559 pteridine-containing compound biosynthetic process IEP Enrichment
MF GO:0043169 cation binding IEP Enrichment
CC GO:0045261 proton-transporting ATP synthase complex, catalytic core F(1) IEP Enrichment
BP GO:0046146 tetrahydrobiopterin metabolic process IEP Enrichment
BP GO:0046165 alcohol biosynthetic process IEP Enrichment
BP GO:0046173 polyol biosynthetic process IEP Enrichment
MF GO:0046422 violaxanthin de-epoxidase activity IEP Enrichment
MF GO:0046857 oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor IEP Enrichment
MF GO:0046872 metal ion binding IEP Enrichment
MF GO:0046906 tetrapyrrole binding IEP Enrichment
MF GO:0046933 proton-transporting ATP synthase activity, rotational mechanism IEP Enrichment
MF GO:0050660 flavin adenine dinucleotide binding IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
CC GO:0098796 membrane protein complex IEP Enrichment
MF GO:0098809 nitrite reductase activity IEP Enrichment
CC GO:1902494 catalytic complex IEP Enrichment
CC GO:1990204 oxidoreductase complex IEP Enrichment
InterPro domains Description Start Stop
IPR003256 Ribosomal_L24 106 170
No external refs found!