Cz13g09020.t1

Description : Clathrin adaptor, alpha-adaptin, appendage, C-terminal subdomain; Clathrin adaptor, alpha/beta/gamma-adaptin, appendage, Ig-like subdomain; Clathrin/coatomer adaptor, adaptin-like, N-terminal [Interproscan].

Gene families : OG_01_0004160 (OrthoFinder) Phylogenetic Tree(s): OG0004160_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cz13g09020.t1
Cluster	HCCA: Cluster_23

Target	Alias	Description	ECC score	Gene Family Method
Cpa\|evm.model.tig00021312.53	tig00021312_g20087.t1	Vesicle trafficking.clathrin coated vesicle (CCV)...	0.04	OrthoFinder
Cre12.g488850	30793466, AP2A1	Vesicle trafficking.clathrin coated vesicle (CCV)...	0.08	OrthoFinder
EOD26100	No alias	Alpha-adaptin [Ensembl].	0.02	OrthoFinder
EOD36408	No alias	Alpha-adaptin [Ensembl].	0.05	OrthoFinder
Sro657_g182570.1	Contig301.g3977	AP-2 complex subunit alpha	0.02	OrthoFinder
Transcript_contig_89356	89356	Clathrin/coatomer adaptor, adaptin-like, N-terminal...	0.02	OrthoFinder
XM_002502805.1	MICPUN_104856, 104856	Alpha-adaptin protein	0.02	OrthoFinder
XM_003060921.1	MicpuC2_60758, 60758	Clathrin adaptor, alpha/beta/gamma-adaptin, appendage,...	0.02	OrthoFinder

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006886	intracellular protein transport	IEA	Interproscan
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015031	protein transport	None	Extended
BP	GO:0016192	vesicle-mediated transport	IEA	Interproscan
CC	GO:0030117	membrane coat	IEA	Interproscan
CC	GO:0030119	AP-type membrane coat adaptor complex	None	Extended
CC	GO:0030131	clathrin adaptor complex	IEA	Interproscan
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0033036	macromolecule localization	None	Extended
BP	GO:0045184	establishment of protein localization	None	Extended
BP	GO:0046907	intracellular transport	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
CC	GO:0098796	membrane protein complex	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003916	DNA topoisomerase activity	IEP	Enrichment
MF	GO:0003917	DNA topoisomerase type I (single strand cut, ATP-independent) activity	IEP	Enrichment
MF	GO:0004672	protein kinase activity	IEP	Enrichment
MF	GO:0005198	structural molecule activity	IEP	Enrichment
MF	GO:0005515	protein binding	IEP	Enrichment
BP	GO:0006265	DNA topological change	IEP	Enrichment
BP	GO:0006468	protein phosphorylation	IEP	Enrichment
BP	GO:0006887	exocytosis	IEP	Enrichment
MF	GO:0016301	kinase activity	IEP	Enrichment
BP	GO:0016310	phosphorylation	IEP	Enrichment
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	IEP	Enrichment
CC	GO:0030118	clathrin coat	IEP	Enrichment
CC	GO:0030120	vesicle coat	IEP	Enrichment
CC	GO:0030125	clathrin vesicle coat	IEP	Enrichment
CC	GO:0030126	COPI vesicle coat	IEP	Enrichment
CC	GO:0030130	clathrin coat of trans-Golgi network vesicle	IEP	Enrichment
CC	GO:0030132	clathrin coat of coated pit	IEP	Enrichment
BP	GO:0032940	secretion by cell	IEP	Enrichment
BP	GO:0046903	secretion	IEP	Enrichment
BP	GO:0071103	DNA conformation change	IEP	Enrichment
CC	GO:0098797	plasma membrane protein complex	IEP	Enrichment
BP	GO:0140352	export from cell	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR003164	Clathrin_a-adaptin_app_sub_C	1010	1118
IPR002553	Clathrin/coatomer_adapt-like_N	28	587
IPR008152	Clathrin_a/b/g-adaptin_app_Ig	895	988

External Links

No external refs found!

Cz13g09020.t1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation