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  5. Cpa|evm.model.tig00001094.30

Cpa|evm.model.tig00001094.30 (tig00001094_g7002.t1)


Aliases : tig00001094_g7002.t1

Description : Transcription elongation factor 1 homolog OS=Oryza sativa subsp. japonica


Gene families : OG_01_0003836 (OrthoFinder) Phylogenetic Tree(s): OG0003836_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00001094.30
Cluster HCCA: Cluster_31

Target Alias Description ECC score Gene Family Method Actions
Cre17.g702550 30782304 No description available 0.02 OrthoFinder
Sro333_g119490.1 Contig3012.g24045 Transcription elongation factor 1 homolog 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Enrichment
MF GO:0004298 threonine-type endopeptidase activity IEP Enrichment
MF GO:0004659 prenyltransferase activity IEP Enrichment
CC GO:0005681 spliceosomal complex IEP Enrichment
CC GO:0005839 proteasome core complex IEP Enrichment
BP GO:0006352 DNA-templated transcription, initiation IEP Enrichment
MF GO:0008318 protein prenyltransferase activity IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Enrichment
MF GO:0016779 nucleotidyltransferase activity IEP Enrichment
BP GO:0018342 protein prenylation IEP Enrichment
BP GO:0032774 RNA biosynthetic process IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
CC GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain IEP Enrichment
CC GO:0033180 proton-transporting V-type ATPase, V1 domain IEP Enrichment
MF GO:0034062 5'-3' RNA polymerase activity IEP Enrichment
MF GO:0046983 protein dimerization activity IEP Enrichment
MF GO:0070003 threonine-type peptidase activity IEP Enrichment
BP GO:0097354 prenylation IEP Enrichment
MF GO:0097747 RNA polymerase activity IEP Enrichment
BP GO:1902600 proton transmembrane transport IEP Enrichment
CC GO:1990904 ribonucleoprotein complex IEP Enrichment
InterPro domains Description Start Stop
IPR007808 Elf1 2 78
No external refs found!