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  5. Cz13g04030.t1

Cz13g04030.t1


Description : Elongation factor EFG, domain V-like; Translation elongation factor EFTu-like, domain 2; Transcription factor, GTP-binding domain [Interproscan].


Gene families : OG_01_0000865 (OrthoFinder) Phylogenetic Tree(s): OG0000865_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cz13g04030.t1
Cluster HCCA: Cluster_71

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020614.28 tig00020614_g12138.t1 Putative elongation factor TypA-like SVR3, chloroplastic... 0.02 OrthoFinder
Dusal.0181s00024.1 33189303 Transcription factor, GTP-binding domain; Translation... 0.04 OrthoFinder
EOD04480 No alias Putative mitochondrial elongation factor [Ensembl]. 0.03 OrthoFinder
OT_15G00430.1 No alias Translation elongation factor EFTu-like, domain 2;... 0.03 OrthoFinder
PTI_24G00400.1 No alias Transcription factor, GTP-binding domain; Elongation... 0.02 OrthoFinder
Sro2131_g315890.1 Contig2224.g18465 Factor TypA-like SVR3, chloroplastic 0.01 OrthoFinder
Sro5_g004520.1 Contig4001.g30767 Factor TypA-like SVR3, chloroplastic 0.03 OrthoFinder
Transcript_contig_57742 57742 Translation elongation factor EFTu-like, domain 2;... 0.03 OrthoFinder
Vocar.0013s0254.1 32896180 Elongation factor EFG, domain V-like; Transcription... 0.06 OrthoFinder
XM_002503341.1 MICPUN_59663, 59663 Translation elongation factor EFTu-like, domain 2;... 0.07 OrthoFinder
lcl|BLLF01002185.1_cds_GFH23064.1_17541 HaLaN_20616, GFH23064 Tr-type G domain-containing protein 0.02 OrthoFinder
lcl|BLLF01007041.1_cds_GFH32732.1_27209 HaLaN_32000, GFH32732 GTP binding protein TypA 0.02 OrthoFinder
lcl|LHPG02000001.1_cds_PRW60987.1_244 PRW60987 GTP binding 0.08 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0002161 aminoacyl-tRNA editing activity IEP Enrichment
MF GO:0004175 endopeptidase activity IEP Enrichment
MF GO:0004222 metalloendopeptidase activity IEP Enrichment
MF GO:0004252 serine-type endopeptidase activity IEP Enrichment
MF GO:0004470 malic enzyme activity IEP Enrichment
MF GO:0004471 malate dehydrogenase (decarboxylating) (NAD+) activity IEP Enrichment
MF GO:0004497 monooxygenase activity IEP Enrichment
MF GO:0004499 N,N-dimethylaniline monooxygenase activity IEP Enrichment
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Enrichment
MF GO:0005506 iron ion binding IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
BP GO:0006020 inositol metabolic process IEP Enrichment
BP GO:0006066 alcohol metabolic process IEP Enrichment
BP GO:0006418 tRNA aminoacylation for protein translation IEP Enrichment
BP GO:0006508 proteolysis IEP Enrichment
BP GO:0006729 tetrahydrobiopterin biosynthetic process IEP Enrichment
BP GO:0007155 cell adhesion IEP Enrichment
MF GO:0008124 4-alpha-hydroxytetrahydrobiopterin dehydratase activity IEP Enrichment
MF GO:0008168 methyltransferase activity IEP Enrichment
MF GO:0008171 O-methyltransferase activity IEP Enrichment
MF GO:0008233 peptidase activity IEP Enrichment
MF GO:0008237 metallopeptidase activity IEP Enrichment
BP GO:0010207 photosystem II assembly IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016615 malate dehydrogenase activity IEP Enrichment
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Enrichment
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Enrichment
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Enrichment
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP Enrichment
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Enrichment
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Enrichment
MF GO:0016887 ATPase IEP Enrichment
BP GO:0019310 inositol catabolic process IEP Enrichment
BP GO:0019751 polyol metabolic process IEP Enrichment
BP GO:0022607 cellular component assembly IEP Enrichment
BP GO:0022610 biological adhesion IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
BP GO:0034311 diol metabolic process IEP Enrichment
BP GO:0034312 diol biosynthetic process IEP Enrichment
BP GO:0042558 pteridine-containing compound metabolic process IEP Enrichment
BP GO:0042559 pteridine-containing compound biosynthetic process IEP Enrichment
BP GO:0043038 amino acid activation IEP Enrichment
BP GO:0043039 tRNA aminoacylation IEP Enrichment
BP GO:0043933 protein-containing complex subunit organization IEP Enrichment
BP GO:0044275 cellular carbohydrate catabolic process IEP Enrichment
BP GO:0044281 small molecule metabolic process IEP Enrichment
BP GO:0046146 tetrahydrobiopterin metabolic process IEP Enrichment
BP GO:0046164 alcohol catabolic process IEP Enrichment
BP GO:0046165 alcohol biosynthetic process IEP Enrichment
BP GO:0046173 polyol biosynthetic process IEP Enrichment
BP GO:0046174 polyol catabolic process IEP Enrichment
MF GO:0050113 inositol oxygenase activity IEP Enrichment
MF GO:0051213 dioxygenase activity IEP Enrichment
BP GO:0051260 protein homooligomerization IEP Enrichment
MF GO:0052689 carboxylic ester hydrolase activity IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
BP GO:0065003 protein-containing complex assembly IEP Enrichment
MF GO:0140101 catalytic activity, acting on a tRNA IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
BP GO:1901615 organic hydroxy compound metabolic process IEP Enrichment
BP GO:1901616 organic hydroxy compound catabolic process IEP Enrichment
BP GO:1901617 organic hydroxy compound biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR000795 T_Tr_GTP-bd_dom 69 256
IPR000640 EFG_V-like 464 546
IPR004161 EFTu-like_2 284 356
No external refs found!