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  5. Cz12g28200.t1

Cz12g28200.t1


Description : PAS domain [Interproscan].


Gene families : OG_01_0000027 (OrthoFinder) Phylogenetic Tree(s): OG0000027_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cz12g28200.t1
Cluster HCCA: Cluster_108

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000025.37 tig00000025_g7945.t1 No description available 0.02 OrthoFinder
Cpa|evm.model.tig00000405.46 tig00000405_g477.t1 Probable histidine kinase 5 OS=Oryza sativa subsp. japonica 0.03 OrthoFinder
Cpa|evm.model.tig00000441.3 tig00000441_g697.t1 No description available 0.02 OrthoFinder
Cpa|evm.model.tig00020911.62 tig00020911_g15766.t1 No description available 0.02 OrthoFinder
Cre17.g708000 30782648, FAP260 No description available 0.02 OrthoFinder
Cz15g11180.t1 No alias Hypothetical protein 0.03 OrthoFinder
Dusal.0012s00037.1 33201991 PAS domain [Interproscan]. 0.07 OrthoFinder
Dusal.0729s00003.1 33203053 PAS domain [Interproscan]. 0.02 OrthoFinder
UNPLg00188.t1 No alias Hypothetical protein 0.07 OrthoFinder
Vocar.0002s0204.1 32891156 PAS domain; PAS fold [Interproscan]. 0.03 OrthoFinder
Vocar.0004s0312.1 32889633 PAS fold [Interproscan]. 0.04 OrthoFinder
Vocar.0005s0217.1 32883525 PAS domain [Interproscan]. 0.02 OrthoFinder
Vocar.0012s0063.1 32895032 PAS domain [Interproscan]. 0.02 OrthoFinder
Vocar.0021s0101.1 32895906 PAS domain [Interproscan]. 0.02 OrthoFinder
lcl|BLLF01000092.1_cds_GFH07404.1_1881 HaLaN_02198, GFH07404 PAS fold [Interproscan]. 0.03 OrthoFinder
lcl|BLLF01000097.1_cds_GFH07482.1_1959 HaLaN_02288, GFH07482 PAS domain [Interproscan]. 0.02 OrthoFinder
lcl|BLLF01000513.1_cds_GFH12539.1_7016 HaLaN_08248, GFH12539 PAS domain-containing protein 0.03 OrthoFinder
lcl|BLLF01000958.1_cds_GFH16182.1_10659 HaLaN_12556, GFH16182 PAS domain-containing protein 0.02 OrthoFinder
lcl|BLLF01001107.1_cds_GFH17174.1_11651 HaLaN_13746, GFH17174 PAS domain-containing protein 0.04 OrthoFinder
lcl|BLLF01001242.1_cds_GFH18052.1_12529 HaLaN_14789, GFH18052 Hypothetical protein 0.02 OrthoFinder
lcl|BLLF01001584.1_cds_GFH20156.1_14633 HaLaN_17235, GFH20156 PAS domain-containing protein 0.03 OrthoFinder
lcl|BLLF01001945.1_cds_GFH21989.1_16466 HaLaN_19386, GFH21989 Hypothetical protein 0.02 OrthoFinder
lcl|BLLF01002366.1_cds_GFH23804.1_18281 HaLaN_21483, GFH23804 Tiny macrocysts protein B 0.02 OrthoFinder
lcl|BLLF01006378.1_cds_GFH32196.1_26673 HaLaN_31377, GFH32196 PAS domain-containing protein 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003989 acetyl-CoA carboxylase activity IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
CC GO:0005875 microtubule associated complex IEP Enrichment
BP GO:0006633 fatty acid biosynthetic process IEP Enrichment
MF GO:0016421 CoA carboxylase activity IEP Enrichment
MF GO:0016885 ligase activity, forming carbon-carbon bonds IEP Enrichment
CC GO:0030286 dynein complex IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR000014 PAS 508 592
No external refs found!