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  5. Cz12g25190.t1

Cz12g25190.t1


Description : Longin domain; Synaptobrevin [Interproscan].


Gene families : OG_01_0000737 (OrthoFinder) Phylogenetic Tree(s): OG0000737_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cz12g25190.t1
Cluster HCCA: Cluster_160

Target Alias Description ECC score Gene Family Method Actions
Cre04.g224750 30790988 Vesicle trafficking.SNARE target membrane recognition... 0.03 OrthoFinder
EOD13309 No alias Longin domain; Synaptobrevin [Interproscan]. 0.01 OrthoFinder
EOD39547 No alias Vesicle-associated membrane protein 7 [Ensembl]. 0.01 OrthoFinder
Sro504_g155900.1 Contig4263.g32256 Vesicle-associated membrane protein 7 0.01 OrthoFinder
Vocar.0049s0026.1 32886560 Longin domain; Synaptobrevin [Interproscan]. 0.01 OrthoFinder
lcl|LHPG02000007.1_cds_PRW57246.1_9146 PRW57246 Vesicle-associated membrane 714 0.01 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0016021 integral component of membrane IEA Interproscan
BP GO:0016192 vesicle-mediated transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity IEP Enrichment
MF GO:0005244 voltage-gated ion channel activity IEP Enrichment
MF GO:0005247 voltage-gated chloride channel activity IEP Enrichment
MF GO:0005253 anion channel activity IEP Enrichment
MF GO:0005254 chloride channel activity IEP Enrichment
BP GO:0006694 steroid biosynthetic process IEP Enrichment
BP GO:0006821 chloride transport IEP Enrichment
BP GO:0008202 steroid metabolic process IEP Enrichment
MF GO:0008308 voltage-gated anion channel activity IEP Enrichment
MF GO:0008519 ammonium transmembrane transporter activity IEP Enrichment
BP GO:0015696 ammonium transport IEP Enrichment
MF GO:0016229 steroid dehydrogenase activity IEP Enrichment
MF GO:0022832 voltage-gated channel activity IEP Enrichment
MF GO:0033764 steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Enrichment
InterPro domains Description Start Stop
IPR001388 Synaptobrevin 123 208
IPR010908 Longin_dom 32 93
No external refs found!