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Description : Bromodomain [Interproscan].
Gene families : OG_01_0001925 (OrthoFinder) Phylogenetic Tree(s): OG0001925_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Cz12g23190.t1 | |
| Cluster | HCCA: Cluster_38 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cre17.g711100 | 30781786 | No description available | 0.02 | OrthoFinder | |
| Transcript_contig_54258 | 54258 | Bromodomain [Interproscan]. | 0.01 | OrthoFinder | |
| XM_003054844.1 | MicpuC2_46179, 46179 | Bromodomain-containing protein | 0.02 | OrthoFinder | |
| lcl|LHPG02000008.1_cds_PRW56767.1_9521 | PRW56767 | Bromodomain-containing 9 | 0.02 | OrthoFinder | |
| lcl|VRMN01000001.1_cds_KAA8498212.1_7165 | KAA8498212 | Transcription factor GTE10 | 0.02 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005515 | protein binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000375 | RNA splicing, via transesterification reactions | IEP | Enrichment |
| BP | GO:0000377 | RNA splicing, via transesterification reactions with bulged adenosine as nucleophile | IEP | Enrichment |
| BP | GO:0000398 | mRNA splicing, via spliceosome | IEP | Enrichment |
| MF | GO:0003676 | nucleic acid binding | IEP | Enrichment |
| MF | GO:0003684 | damaged DNA binding | IEP | Enrichment |
| BP | GO:0005984 | disaccharide metabolic process | IEP | Enrichment |
| BP | GO:0005991 | trehalose metabolic process | IEP | Enrichment |
| BP | GO:0005992 | trehalose biosynthetic process | IEP | Enrichment |
| BP | GO:0006397 | mRNA processing | IEP | Enrichment |
| BP | GO:0006720 | isoprenoid metabolic process | IEP | Enrichment |
| BP | GO:0006721 | terpenoid metabolic process | IEP | Enrichment |
| MF | GO:0008170 | N-methyltransferase activity | IEP | Enrichment |
| MF | GO:0008276 | protein methyltransferase activity | IEP | Enrichment |
| BP | GO:0008299 | isoprenoid biosynthetic process | IEP | Enrichment |
| MF | GO:0008661 | 1-deoxy-D-xylulose-5-phosphate synthase activity | IEP | Enrichment |
| BP | GO:0009311 | oligosaccharide metabolic process | IEP | Enrichment |
| BP | GO:0009312 | oligosaccharide biosynthetic process | IEP | Enrichment |
| BP | GO:0016071 | mRNA metabolic process | IEP | Enrichment |
| BP | GO:0016114 | terpenoid biosynthetic process | IEP | Enrichment |
| MF | GO:0016278 | lysine N-methyltransferase activity | IEP | Enrichment |
| MF | GO:0016279 | protein-lysine N-methyltransferase activity | IEP | Enrichment |
| CC | GO:0016459 | myosin complex | IEP | Enrichment |
| MF | GO:0016744 | transketolase or transaldolase activity | IEP | Enrichment |
| MF | GO:0018024 | histone-lysine N-methyltransferase activity | IEP | Enrichment |
| MF | GO:0030151 | molybdenum ion binding | IEP | Enrichment |
| BP | GO:0034637 | cellular carbohydrate biosynthetic process | IEP | Enrichment |
| MF | GO:0042054 | histone methyltransferase activity | IEP | Enrichment |
| MF | GO:0043168 | anion binding | IEP | Enrichment |
| BP | GO:0046351 | disaccharide biosynthetic process | IEP | Enrichment |
| MF | GO:0097159 | organic cyclic compound binding | IEP | Enrichment |
| MF | GO:0140096 | catalytic activity, acting on a protein | IEP | Enrichment |
| MF | GO:1901363 | heterocyclic compound binding | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001487 | Bromodomain | 582 | 662 |
| No external refs found! |