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  5. Cpa|evm.model.tig00001093.2

Cpa|evm.model.tig00001093.2 (tig00001093_g6877.t1)


Aliases : tig00001093_g6877.t1

Description : Vesicle trafficking.Coat protein I (COPI) coatomer machinery.coat protein recruiting.ARF-GTPase


Gene families : OG_01_0000272 (OrthoFinder) Phylogenetic Tree(s): OG0000272_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00001093.2
Cluster HCCA: Cluster_31

Target Alias Description ECC score Gene Family Method Actions
Cre02.g102000 30785410, ARL5 Vesicle trafficking.Coat protein I (COPI) coatomer... 0.02 OrthoFinder
Cre12.g535900 30792839, ARL1 Vesicle trafficking.Coat protein I (COPI) coatomer... 0.02 OrthoFinder
Cz05g21190.t1 No alias Small GTPase superfamily, ARF/SAR type [Interproscan]. 0.03 OrthoFinder
Dusal.0088s00030.1 33203564 Small GTPase superfamily, ARF/SAR type [Interproscan]. 0.01 OrthoFinder
OT_17G01460.1 No alias Small GTPase superfamily, ARF/SAR type [Interproscan]. 0.02 OrthoFinder
XM_003055098.1 MicpuC2_7976, 7976 Small GTPase superfamily, ARF/SAR type [Interproscan]. 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004674 protein serine/threonine kinase activity IEP Enrichment
CC GO:0005667 transcription regulator complex IEP Enrichment
BP GO:0006405 RNA export from nucleus IEP Enrichment
BP GO:0006406 mRNA export from nucleus IEP Enrichment
BP GO:0006457 protein folding IEP Enrichment
BP GO:0006897 endocytosis IEP Enrichment
BP GO:0006913 nucleocytoplasmic transport IEP Enrichment
CC GO:0008541 proteasome regulatory particle, lid subcomplex IEP Enrichment
BP GO:0015931 nucleobase-containing compound transport IEP Enrichment
CC GO:0016272 prefoldin complex IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
BP GO:0050657 nucleic acid transport IEP Enrichment
BP GO:0050658 RNA transport IEP Enrichment
BP GO:0051028 mRNA transport IEP Enrichment
BP GO:0051168 nuclear export IEP Enrichment
BP GO:0051169 nuclear transport IEP Enrichment
BP GO:0051236 establishment of RNA localization IEP Enrichment
InterPro domains Description Start Stop
IPR006689 Small_GTPase_ARF/SAR 6 176
No external refs found!