Cz12g20100.t1


Description : AP2/ERF domain [Interproscan].


Gene families : OG_01_0000238 (OrthoFinder) Phylogenetic Tree(s): OG0000238_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cz12g20100.t1
Cluster HCCA: Cluster_89

Target Alias Description ECC score Gene Family Method Actions
Cz01g17080.t1 No alias AP2/ERF domain [Interproscan]. 0.06 OrthoFinder
Cz03g32030.t1 No alias AP2/ERF domain [Interproscan]. 0.06 OrthoFinder
Cz04g34070.t1 No alias AP2/ERF domain [Interproscan]. 0.05 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0006259 DNA metabolic process IEP Enrichment
MF GO:0008146 sulfotransferase activity IEP Enrichment
BP GO:0015074 DNA integration IEP Enrichment
MF GO:0015276 ligand-gated ion channel activity IEP Enrichment
MF GO:0016782 transferase activity, transferring sulphur-containing groups IEP Enrichment
MF GO:0022834 ligand-gated channel activity IEP Enrichment
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 421 482
IPR001471 AP2/ERF_dom 525 576
No external refs found!