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  5. Cpa|evm.model.tig00001093.10

Cpa|evm.model.tig00001093.10 (tig00001093_g6885.t1)


Aliases : tig00001093_g6885.t1

Description : Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU proteome component.RPL24 component


Gene families : OG_01_0003386 (OrthoFinder) Phylogenetic Tree(s): OG0003386_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00001093.10
Cluster HCCA: Cluster_211

Target Alias Description ECC score Gene Family Method Actions
Cre07.g325712 30774763 Protein biosynthesis.cytosolic ribosome.large subunit... 0.09 OrthoFinder
EOD39668 No alias Ribosomal protein L24e-related [Interproscan]. 0.02 OrthoFinder
PTI_17G01470.1 No alias Ribosomal protein L24e-related [Interproscan]. 0.02 OrthoFinder
Sro635_g179190.1 Contig3513.g27220 Probable ribosome biogenesis protein RLP24 0.03 OrthoFinder
TP04G08130.1 No alias Ribosomal protein L24e-related [Interproscan]. 0.05 OrthoFinder
Transcript_contig_56957 56957 Ribosomal protein L24e-related [Interproscan]. 0.02 OrthoFinder
lcl|LHPG02000005.1_cds_PRW58481.1_7847 PRW58481 Putative ribosome biogenesis RLP24 0.02 OrthoFinder
lcl|VRMN01000005.1_cds_KAA8494136.1_4000 KAA8494136 Putative ribosome biogenesis protein RLP24 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Enrichment
MF GO:0034062 5'-3' RNA polymerase activity IEP Enrichment
MF GO:0097747 RNA polymerase activity IEP Enrichment
InterPro domains Description Start Stop
IPR000988 Ribosomal_L24e-rel 1 65
No external refs found!